RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 DGKGP49619 791 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 KCNA1Q09470 495 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 EFCAB2Q5VUJ9 269 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 CHSY3Q70JA7 882 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 RAB44Q7Z6P3 723 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-220ENST00000553491 TMEM151AQ8N4L1 468 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 FYCO1Q9BQS8 1478 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 OPLAHO14841 1288 aa7.21□□□□□ -1.26
ATXN3-220ENST00000553491 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
ATXN3-220ENST00000553491 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-220ENST00000553491 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-220ENST00000553491 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 MICAL2O94851 1124 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 IDH3AP50213 366 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.2□□□□□ -1.26
ATXN3-220ENST00000553491 STARD13Q9Y3M8 1113 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 ARHGAP5Q13017 1502 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 MAGI3Q5TCQ9 1506 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 CFAP74Q9C0B2 1584 aa7.2□□□□□ -1.26
ATXN3-220ENST00000553491 FANCAO15360 1455 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 SUPT6HQ7KZ85 1726 aaKnown RBP7.19□□□□□ -1.26
ATXN3-220ENST00000553491 TNFRSF10BO14763 440 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 ITGB2P05107 769 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 COL8A1P27658 744 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 SSFA2P28290 1259 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 IFT43Q96FT9 208 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-220ENST00000553491 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
ATXN3-220ENST00000553491 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
ATXN3-220ENST00000553491 AMPD1P23109 780 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 COL9A3Q14050 684 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-220ENST00000553491 ETFBKMTQ8IXQ9 262 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 BHMTQ93088 406 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 SUV39H2Q9H5I1 410 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 EFCC1Q9HA90 598 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-220ENST00000553491 CCNB3Q8WWL7 1395 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
ATXN3-220ENST00000553491 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-220ENST00000553491 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 ARSDP51689 593 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-220ENST00000553491 CCINQ13939 588 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 B4GALNT3Q6L9W6 998 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 C16orf46Q6P387 395 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 TREML1Q86YW5 311 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 RICTORQ6R327 1708 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 PLCH2O75038 1416 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 SCAPERQ9BY12 1400 aa7.17□□□□□ -1.26
ATXN3-220ENST00000553491 ITSN2Q9NZM3 1697 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
ATXN3-220ENST00000553491 EGFRP00533 1210 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 ADH7P40394 386 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 MLECQ14165 292 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-220ENST00000553491 C20orf204Q6ZNR8 217 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 AFAP1Q8N556 730 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 ZFATQ9P243 1243 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 USP20Q9Y2K6 914 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 IVNS1ABPQ9Y6Y0 642 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 CFAP65Q6ZU64 1925 aaKnown RBP7.16□□□□□ -1.26
ATXN3-220ENST00000553491 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-220ENST00000553491 ADGRL1O94910 1474 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 NEO1Q92859 1461 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 TIAM1Q13009 1591 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
ATXN3-220ENST00000553491 GNB5O14775 395 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 SCNN1AP37088 669 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
ATXN3-220ENST00000553491 TXNDC2Q86VQ3 553 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 TRIM11Q96F44 468 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 RTCBQ9Y3I0 505 aaKnown RBP7.15□□□□□ -1.26
ATXN3-220ENST00000553491 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-220ENST00000553491 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
ATXN3-220ENST00000553491 ARAP3Q8WWN8 1544 aa7.15□□□□□ -1.27
ATXN3-220ENST00000553491 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 EPB42P16452 691 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 ALAS2P22557 587 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 BRD2P25440 801 aaKnown RBP7.14□□□□□ -1.27
ATXN3-220ENST00000553491 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 MICALL1Q8N3F8 863 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
ATXN3-220ENST00000553491 GNEQ9Y223 722 aaKnown RBP7.14□□□□□ -1.27
ATXN3-220ENST00000553491 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 ZNF644Q9H582 1327 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms