RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 CWC25Q9NXE8 425 aaPredicted RBP5.96□□□□□ -1.46
PFDN5-219ENST00000553171 ABT1Q9ULW3 272 aaKnown RBP5.96□□□□□ -1.46
PFDN5-219ENST00000553171 TRIM35Q9UPQ4 493 aa5.96□□□□□ -1.46
PFDN5-219ENST00000553171 PDZRN3Q9UPQ7 1066 aa5.96□□□□□ -1.46
PFDN5-219ENST00000553171 ARFGEF1Q9Y6D6 1849 aa5.96□□□□□ -1.46
PFDN5-219ENST00000553171 UNC79Q9P2D8 2635 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 N4BP2Q86UW6 1770 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 RANBP2P49792 3224 aaKnown RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 PLEKHH1Q9ULM0 1364 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 PIK3C2AO00443 1686 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 KIF13BQ9NQT8 1826 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 TRIM6-TRIM34B2RNG4 842 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 AOC2O75106 756 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 HMMRO75330 724 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 LMNB1P20700 586 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 CASQ1P31415 396 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 FLT3P36888 993 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 HMGN5P82970 282 aaKnown RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 IER5LQ5T953 404 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 KLHL10Q6JEL2 608 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 TOM1L2Q6ZVM7 507 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 SMIM5Q71RC9 77 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 CTU1Q7Z7A3 348 aaKnown RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 CCAR1Q8IX12 1150 aaKnown RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 HS6ST3Q8IZP7 471 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 COL26A1Q96A83 441 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 BORCS6Q96GS4 357 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 TRIM34Q9BYJ4 488 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 RSPH9Q9H1X1 276 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 NRBP1Q9UHY1 535 aa5.95□□□□□ -1.46
PFDN5-219ENST00000553171 CIZ1Q9ULV3 898 aaPredicted RBP5.95□□□□□ -1.46
PFDN5-219ENST00000553171 PES1O00541 588 aaKnown RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 PARNO95453 639 aaKnown RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 ZC3H12AQ5D1E8 599 aaKnown RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 C1QTNF12Q5T7M4 302 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 CTR9Q6PD62 1173 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 C11orf96Q7Z7L8 435 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 AGBL1Q96MI9 1066 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 NCAPGQ9BPX3 1015 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 PIM2Q9P1W9 311 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 KIAA1522Q9P206 1035 aaPredicted RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 STK26Q9P289 416 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 PUF60Q9UHX1 559 aaKnown RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 STXBP5LQ9Y2K9 1186 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 KIF16BQ96L93 1317 aa5.94□□□□□ -1.46
PFDN5-219ENST00000553171 BRCA1P38398 1863 aaKnown RBP5.94□□□□□ -1.46
PFDN5-219ENST00000553171 ABCC11Q96J66 1382 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 ANKARQ7Z5J8 1434 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 KLHL33A6NCF5 533 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 HMGB2P26583 209 aaKnown RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 IGBP1P78318 339 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 PKN2Q16513 984 aaKnown RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 DALRD3Q5D0E6 543 aaKnown RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 MRRFQ96E11 262 aaKnown RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 SMC4Q9NTJ3 1288 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
PFDN5-219ENST00000553171 FAN1Q9Y2M0 1017 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 KNSTRNQ9Y448 316 aa5.93□□□□□ -1.46
PFDN5-219ENST00000553171 KAT6BQ8WYB5 2073 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 MYOM3Q5VTT5 1437 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 ZMYND10O75800 440 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 SETSIPP0DME0 302 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 NAP1L1P55209 391 aaKnown RBP5.92□□□□□ -1.46
PFDN5-219ENST00000553171 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
PFDN5-219ENST00000553171 ANKRD13DQ6ZTN6 518 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 PCGF5Q86SE9 256 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 ANKRD13BQ86YJ7 626 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 PDILTQ8N807 584 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 ARPC5LQ9BPX5 153 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 NUCKS1Q9H1E3 243 aaKnown RBP5.92□□□□□ -1.46
PFDN5-219ENST00000553171 DONSONQ9NYP3 566 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 CTDP1Q9Y5B0 961 aaPredicted RBP5.92□□□□□ -1.46
PFDN5-219ENST00000553171 WDR17Q8IZU2 1322 aa5.92□□□□□ -1.46
PFDN5-219ENST00000553171 USP54Q70EL1 1684 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 WNK3Q9BYP7 1800 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 hCG_2014768A0A024R1R8 64 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 IPO5O00410 1097 aaKnown RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 TPM3P06753 285 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 PAX7P23759 505 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 RASSF7Q02833 373 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 GRM1Q13255 1194 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 DZIP3Q86Y13 1208 aaKnown RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 CNTROBQ8N137 903 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 CCDC24Q8N4L8 307 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 C1orf131Q8NDD1 294 aaKnown RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 ERCC4Q92889 916 aaPredicted RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 HS3ST6Q96QI5 342 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 TAF1DQ9H5J8 278 aaPredicted RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 CHPF2Q9P2E5 772 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 PAXBP1Q9Y5B6 917 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 MINK1Q8N4C8 1332 aaPredicted RBP5.91□□□□□ -1.46
PFDN5-219ENST00000553171 RAB3GAP2Q9H2M9 1393 aa5.91□□□□□ -1.46
PFDN5-219ENST00000553171 CHD8Q9HCK8 2581 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms