RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DOT1LQ8TEK3 1739 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 PCDH11XQ9BZA7 1347 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 PCDH11YQ9BZA8 1340 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 SASH1O94885 1247 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 SNRPA1P09661 255 aaKnown RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 SYT1P21579 422 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 NBPF10Q6P3W6 841 aaKnown RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 NBPF15Q8N660 670 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 ZBTB9Q96C00 473 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 MYD88Q99836 296 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 METTL22Q9BUU2 404 aaPredicted RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 SNX14Q9Y5W7 946 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 ZSCAN20P17040 1043 aaPredicted RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 CABP4P57796 275 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 SETQ01105 290 aaPredicted RBP8.69□□□□□ -1.02
BEST3-212ENST00000553096 GCKRQ14397 625 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 KLHDC4Q8TBB5 520 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 FEZ1Q99689 392 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
BEST3-212ENST00000553096 AK2P54819 239 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 AFF2P51816 1311 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 FIBPO43427 364 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 DDX58O95786 925 aaKnown RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 TTC5Q8N0Z6 440 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 ZCRB1Q8TBF4 217 aaKnown RBP8.68□□□□□ -1.02
BEST3-212ENST00000553096 FAM200AQ8TCP9 573 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 ANKRD7Q92527 254 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 MYH3P11055 1940 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 TCHHQ07283 1943 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 CCDC171Q6TFL3 1326 aa8.68□□□□□ -1.02
BEST3-212ENST00000553096 CTIFO43310 598 aaKnown RBP8.67□□□□□ -1.02
BEST3-212ENST00000553096 CASP7P55210 303 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 VPS53Q5VIR6 699 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 LSG1Q9H089 658 aaKnown RBP8.67□□□□□ -1.02
BEST3-212ENST00000553096 NUP98P52948 1817 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 DISP2A7MBM2 1401 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 ELP1O95163 1332 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 RFX5P48382 616 aaPredicted RBP8.67□□□□□ -1.02
BEST3-212ENST00000553096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.67□□□□□ -1.02
BEST3-212ENST00000553096 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 COL15A1P39059 1388 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 TTC41PQ6P2S7 1318 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 IL2RBP14784 551 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 PDCP20941 246 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
BEST3-212ENST00000553096 EAF2Q96CJ1 260 aaPredicted RBP8.67□□□□□ -1.02
BEST3-212ENST00000553096 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 RIOK3O14730 519 aaKnown RBP8.66□□□□□ -1.02
BEST3-212ENST00000553096 KRT85P78386 507 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 GIMAP6Q6P9H5 292 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 EP400Q96L91 3159 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 PTCD1O75127 700 aaKnown RBP8.66□□□□□ -1.02
BEST3-212ENST00000553096 CAVIN2O95810 425 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 GJB2P29033 226 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 CBX1P83916 185 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 SIL1Q9H173 461 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 NUP62CLQ9H1M0 184 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 PDRG1Q9NUG6 133 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 USP21Q9UK80 565 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 MTMR6Q9Y217 621 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 KAT6BQ8WYB5 2073 aa8.66□□□□□ -1.02
BEST3-212ENST00000553096 SMTNL1A8MU46 457 aa8.65□□□□□ -1.02
BEST3-212ENST00000553096 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
BEST3-212ENST00000553096 GLRX3O76003 335 aaKnown RBP8.65□□□□□ -1.02
BEST3-212ENST00000553096 AACSQ86V21 672 aa8.65□□□□□ -1.02
BEST3-212ENST00000553096 KCNF1Q9H3M0 494 aa8.65□□□□□ -1.02
BEST3-212ENST00000553096 PAXBP1Q9Y5B6 917 aa8.65□□□□□ -1.02
BEST3-212ENST00000553096 CASTP20810 708 aaKnown RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 RABL6Q3YEC7 729 aaPredicted RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 ZNF772Q68DY9 489 aaPredicted RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 C17orf53Q8N3J3 647 aaPredicted RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 KCNB2Q92953 911 aa8.65□□□□□ -1.03
BEST3-212ENST00000553096 GPATCH3Q96I76 525 aa8.65□□□□□ -1.03
BEST3-212ENST00000553096 QTRT2Q9H974 415 aaKnown RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 DDX19AQ9NUU7 478 aaKnown RBP8.65□□□□□ -1.03
BEST3-212ENST00000553096 OGFRQ9NZT2 677 aa8.65□□□□□ -1.03
BEST3-212ENST00000553096 PYCARDQ9ULZ3 195 aa8.65□□□□□ -1.03
BEST3-212ENST00000553096 A1BGP04217 495 aa8.64□□□□□ -1.03
BEST3-212ENST00000553096 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms