RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
PPFIA2-227ENST00000552948 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 FAM160A1Q05DH4 1040 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 PSME1Q06323 249 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 TTLL5Q6EMB2 1281 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 MRFAP1L1Q96HT8 127 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 IGSF1Q8N6C5 1336 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 SASH1O94885 1247 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 MARCKSP29966 332 aaPredicted RBP13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 C8orf76Q96K31 380 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 HECW2Q9P2P5 1572 aa13.48□□□□□ -0.25
PPFIA2-227ENST00000552948 SCRN1Q12765 414 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 RESTQ13127 1097 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 GPS2Q13227 327 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 ALDH1L1O75891 902 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 CCDC34Q96HJ3 373 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 TAF5LO75529 589 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 TFCP2Q12800 502 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 UTP14AQ9BVJ6 771 aaKnown RBP13.47□□□□□ -0.25
PPFIA2-227ENST00000552948 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 SLFN14P0C7P3 912 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 RALYLQ86SE5 291 aaKnown RBP13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 DBNDD2Q9BQY9 259 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 CARD6Q9BX69 1037 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 GOLPH3LQ9H4A5 285 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 MORC2Q9Y6X9 1032 aaPredicted RBP13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 APPP05067 770 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
PPFIA2-227ENST00000552948 CYP21A2P08686 494 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 UBASH3AP57075 661 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 GOLGA8FQ08AF8 430 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 GOLGA8DPQ0D2H9 430 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 IQCB1Q15051 598 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 SYCP1Q15431 976 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 DPCR1Q3MIW9 517 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 SNRKQ9NRH2 765 aa13.46□□□□□ -0.26
PPFIA2-227ENST00000552948 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 GNG11P61952 73 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 FRMPD1Q5SYB0 1578 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 CSB-PGBD3P0DP91 1061 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 DHX32Q7L7V1 743 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 ORC3Q9UBD5 711 aaPredicted RBP13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 NEK11Q8NG66 645 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
PPFIA2-227ENST00000552948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 NDUFA8P51970 172 aa13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
PPFIA2-227ENST00000552948 TTC5Q8N0Z6 440 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 USP6P35125 1406 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 A0A087WZG4 1122 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 SPTLC2O15270 562 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 CCP110O43303 1012 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 CLCN6P51797 869 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 ESCO1Q5FWF5 840 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 CDC25BP30305 580 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 CCZ1BP86790 482 aa13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
PPFIA2-227ENST00000552948 EVCP57679 992 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 TIMM10P62072 90 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 FANCCQ00597 558 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 CPLX3Q8WVH0 158 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 RCOR1Q9UKL0 485 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 CASQ1P31415 396 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 LMAN1P49257 510 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 TRDNQ13061 729 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 TRIM34Q9BYJ4 488 aa13.42□□□□□ -0.26
PPFIA2-227ENST00000552948 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms