RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
GNPTAB-210ENST00000552681 GTF2A1LQ9UNN4 478 aa10.4□□□□□ -0.74
GNPTAB-210ENST00000552681 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
GNPTAB-210ENST00000552681 TNFAIP3P21580 790 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 HOXC13P31276 330 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 GJA8P48165 433 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 LCA5Q86VQ0 697 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 DDX42Q86XP3 938 aaKnown RBP eCLIP10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 CFAP53Q96M91 514 aa10.4□□□□□ -0.75
GNPTAB-210ENST00000552681 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 VARSP26640 1264 aaKnown RBP10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 PDXDC2PQ6P474 469 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 PGBD4Q96DM1 585 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 IPPQ9Y573 584 aa10.39□□□□□ -0.75
GNPTAB-210ENST00000552681 SNX2O60749 519 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 CTSHP09668 335 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 FOSL1P15407 271 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 HALP42357 657 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 PAK2Q13177 524 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 SWI5Q1ZZU3 235 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 RAI14Q9P0K7 980 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 CASQ1P31415 396 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 ETFBP38117 255 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 SARSP49591 514 aaKnown RBP10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 MORC3Q14149 939 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 HYIQ5T013 277 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 FLCNQ8NFG4 579 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 GAS2L2Q8NHY3 880 aa10.38□□□□□ -0.75
GNPTAB-210ENST00000552681 AKAP10O43572 662 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 AGR2O95994 175 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 FKBP4Q02790 459 aaKnown RBP eCLIP10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 NCOA4Q13772 614 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 MFSD4BQ5TF39 518 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 NGEFQ8N5V2 710 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 TRIM55Q9BYV6 548 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 C22orf23Q9BZE7 217 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 XPO4Q9C0E2 1151 aaKnown RBP10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 LEMD3Q9Y2U8 911 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 IPO5O00410 1097 aaKnown RBP10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 SQSTM1Q13501 440 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 C21orf62-AS1Q17RA5 79 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 MAATS1Q7Z4T9 603 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 TIFAQ96CG3 184 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 RANBP17Q9H2T7 1088 aaKnown RBP10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 CXXC1Q9P0U4 656 aaPredicted RBP10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 STK26Q9P289 416 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 ZNF652Q9Y2D9 606 aa10.37□□□□□ -0.75
GNPTAB-210ENST00000552681 F2P00734 622 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 GLULP15104 373 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 SERPINB3P29508 390 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 HNRNPLLQ8WVV9 542 aaKnown RBP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 TBC1D31Q96DN5 1066 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 TRMT2BQ96GJ1 504 aaKnown RBP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 MRGBPQ9NV56 204 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 INMTO95050 263 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 ZNF132P52740 706 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 EIF5P55010 431 aaKnown RBP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 IFT88Q13099 833 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 RC3H1Q5TC82 1133 aaKnown RBP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 PPP4R3AQ6IN85 833 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 LVRNQ6Q4G3 990 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 ZNF496Q96IT1 587 aaPredicted RBP10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 FEZ1Q99689 392 aa10.36□□□□□ -0.75
GNPTAB-210ENST00000552681 WASHC2CQ9Y4E1 1318 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 VGLL3A8MV65 326 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 KATNA1O75449 491 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 CALD1Q05682 793 aaKnown RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 WAPLQ7Z5K2 1190 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 SH3GLB2Q9NR46 395 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 CDV3Q9UKY7 258 aaKnown RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 POLA1P09884 1462 aaPredicted RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 MZF1P28698 734 aaPredicted RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 C16orf87Q6PH81 154 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms