RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ITGA6P23229 1130 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 CRKLP46109 303 aaKnown RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 SIK1P57059 783 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 ALDH8A1Q9H2A2 487 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 GREM2Q9H772 168 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 HELLSQ9NRZ9 838 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 RIPOR2Q9Y4F9 1068 aa16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-216ENST00000552199 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
RAB3IP-216ENST00000552199 ANKRD18BA2A2Z9 1011 aa16.77■□□□□ 0.28
RAB3IP-216ENST00000552199 LARGE1O95461 756 aa16.77■□□□□ 0.28
RAB3IP-216ENST00000552199 CCDC158Q5M9N0 1113 aa16.77■□□□□ 0.28
RAB3IP-216ENST00000552199 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.28
RAB3IP-216ENST00000552199 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.27
RAB3IP-216ENST00000552199 ADORA1P30542 326 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 ITPK1Q13572 414 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 KRT32Q14532 448 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 TTC39AQ5SRH9 613 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
RAB3IP-216ENST00000552199 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 METTL24Q5JXM2 366 aa16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 AK7Q96M32 723 aa16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
RAB3IP-216ENST00000552199 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 ME3Q16798 604 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
RAB3IP-216ENST00000552199 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB3IP-216ENST00000552199 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB3IP-216ENST00000552199 SLFNL1Q499Z3 407 aa16.73■□□□□ 0.27
RAB3IP-216ENST00000552199 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
RAB3IP-216ENST00000552199 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
RAB3IP-216ENST00000552199 KCNQ2O43526 872 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 MRE11P49959 708 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 ST3GAL1Q11201 340 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 CYP21A2P08686 494 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 SYT1P21579 422 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 VPS72Q15906 364 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
RAB3IP-216ENST00000552199 MAST3O60307 1309 aa16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 STX6O43752 255 aa16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 GJB2P29033 226 aa16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 SCARF1Q14162 830 aa16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
RAB3IP-216ENST00000552199 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 GPT2Q8TD30 523 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 PDE8BO95263 885 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 ZAP70P43403 619 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 ZNF512BQ96KM6 892 aaPredicted RBP16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 C8orf37Q96NL8 207 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 LRP5O75197 1615 aa16.7■□□□□ 0.26
RAB3IP-216ENST00000552199 AKAP11Q9UKA4 1901 aa16.69■□□□□ 0.26
RAB3IP-216ENST00000552199 M0R2C6 588 aa16.69■□□□□ 0.26
RAB3IP-216ENST00000552199 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
RAB3IP-216ENST00000552199 OSBP2Q969R2 916 aa16.69■□□□□ 0.26
RAB3IP-216ENST00000552199 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
RAB3IP-216ENST00000552199 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 MROH5Q6ZUA9 1318 aa16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 MYH7P12883 1935 aa16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
RAB3IP-216ENST00000552199 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms