RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 IL1RAPL2Q9NP60 686 aa6.4□□□□□ -1.38
CCNT1-204ENST00000551989 DDX21Q9NR30 783 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCNT1-204ENST00000551989 PDRG1Q9NUG6 133 aa6.4□□□□□ -1.38
CCNT1-204ENST00000551989 C9orf78Q9NZ63 289 aaPredicted RBP6.4□□□□□ -1.38
CCNT1-204ENST00000551989 CHPF2Q9P2E5 772 aa6.4□□□□□ -1.38
CCNT1-204ENST00000551989 RBM27Q9P2N5 1060 aaKnown RBP6.4□□□□□ -1.38
CCNT1-204ENST00000551989 KIF3AQ9Y496 699 aa6.4□□□□□ -1.38
CCNT1-204ENST00000551989 PXDNQ92626 1479 aa6.4□□□□□ -1.39
CCNT1-204ENST00000551989 TJP1Q07157 1748 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 MYH3P11055 1940 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 NUTM2FA1L443 756 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 GRM8O00222 908 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 CCDC192P0DO97 292 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 CASTP20810 708 aaKnown RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 G3BP1Q13283 466 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 DHX8Q14562 1220 aaKnown RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 NECTIN1Q15223 517 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 ANKLE2Q86XL3 938 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 NUTM1Q86Y26 1132 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 UPF1Q92900 1129 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 MAP4K1Q92918 833 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 FUCA2Q9BTY2 467 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 UPF3BQ9BZI7 483 aaKnown RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 PHAXQ9H814 394 aaKnown RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 DDX19AQ9NUU7 478 aaKnown RBP6.39□□□□□ -1.39
CCNT1-204ENST00000551989 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
CCNT1-204ENST00000551989 NBPF7P0C2Y1 421 aaPredicted RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 GJB2P29033 226 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 CHAF1AQ13111 956 aaPredicted RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 TSHZ3Q63HK5 1081 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 BLOC1S2Q6QNY1 142 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 CWC27Q6UX04 472 aaKnown RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 ARHGEF25Q86VW2 580 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 JAKMIP1Q96N16 626 aaKnown RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 LLPHQ9BRT6 129 aaKnown RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 ZSCAN16Q9H4T2 348 aaPredicted RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 MTMR6Q9Y217 621 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 TMEM94Q12767 1356 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 NPHP4O75161 1426 aaPredicted RBP6.38□□□□□ -1.39
CCNT1-204ENST00000551989 GLI3P10071 1580 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 ANKRD36CQ5JPF3 1778 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 CHD4Q14839 1912 aa6.38□□□□□ -1.39
CCNT1-204ENST00000551989 PALLDQ8WX93 1383 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 ABCC12Q96J65 1359 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 UQCRHLA0A096LP55 91 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 CTAGE5O15320 804 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 GTPBP6O43824 516 aaPredicted RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 KDM4AO75164 1064 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 RGS20O76081 388 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 UQCRHP07919 91 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 EIF2S2P20042 333 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 PTPREP23469 700 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 KCNJ4P48050 445 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 PSME1Q06323 249 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 LRRFIP1Q32MZ4 808 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 NBPF6Q5VWK0 638 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 USPL1Q5W0Q7 1092 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 CREB3L3Q68CJ9 461 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 THSD4Q6ZMP0 1018 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 RBM43Q6ZSC3 357 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 AACSQ86V21 672 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 MYRIPQ8NFW9 859 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 FAM200AQ8TCP9 573 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 NBPF4Q96M43 638 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 GPR108Q9NPR9 543 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 COPRSQ9NQ92 184 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 NSFL1CQ9UNZ2 370 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 MAP3K2Q9Y2U5 619 aa6.37□□□□□ -1.39
CCNT1-204ENST00000551989 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 RBM8AQ9Y5S9 174 aaKnown RBP6.37□□□□□ -1.39
CCNT1-204ENST00000551989 SH3TC1Q8TE82 1336 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 SLC27A2O14975 620 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 NEMFO60524 1076 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 HSP90B1P14625 803 aaKnown RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 ATP5JP18859 108 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 RPS6KB1P23443 525 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 MFSD10Q14728 455 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 SYCP1Q15431 976 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 RABL6Q3YEC7 729 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 LARP1BQ659C4 914 aaKnown RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 PRPF40BQ6NWY9 871 aaKnown RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 PAXIP1Q6ZW49 1069 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 CCDC83Q8IWF9 413 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 NECTIN2Q92692 538 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 FSD1Q9BTV5 496 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 CFAP45Q9UL16 551 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 SPG7Q9UQ90 795 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 CNPY2Q9Y2B0 182 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 ARAP2Q8WZ64 1704 aa6.36□□□□□ -1.39
CCNT1-204ENST00000551989 COL22A1Q8NFW1 1626 aaPredicted RBP6.36□□□□□ -1.39
CCNT1-204ENST00000551989 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms