RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 REC8O95072 547 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 EN1Q05925 392 aaPredicted RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 VGLL2Q8N8G2 317 aa17.32■□□□□ 0.36
LETMD1-229ENST00000551261 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
LETMD1-229ENST00000551261 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
LETMD1-229ENST00000551261 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
LETMD1-229ENST00000551261 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
LETMD1-229ENST00000551261 LPIN2Q92539 896 aa17.31■□□□□ 0.36
LETMD1-229ENST00000551261 PUS3Q9BZE2 481 aaKnown RBP17.31■□□□□ 0.36
LETMD1-229ENST00000551261 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-229ENST00000551261 LRRFIP1Q32MZ4 808 aaKnown RBP17.3■□□□□ 0.36
LETMD1-229ENST00000551261 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
LETMD1-229ENST00000551261 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
LETMD1-229ENST00000551261 A0A1B0GUL6 1792 aa17.3■□□□□ 0.36
LETMD1-229ENST00000551261 RAD50Q92878 1312 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
LETMD1-229ENST00000551261 MSH5O43196 834 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 IFIT1P09914 478 aaKnown RBP17.29■□□□□ 0.36
LETMD1-229ENST00000551261 SLC5A1P13866 664 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 RUFY2Q8WXA3 655 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 DBNDD2Q9BQY9 259 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
LETMD1-229ENST00000551261 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
LETMD1-229ENST00000551261 ZBTB22O15209 634 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
LETMD1-229ENST00000551261 DDR1Q08345 913 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 GRAPQ13588 217 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-229ENST00000551261 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
LETMD1-229ENST00000551261 HAUS7Q99871 368 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
LETMD1-229ENST00000551261 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
LETMD1-229ENST00000551261 FGFR2P21802 821 aa17.27■□□□□ 0.36
LETMD1-229ENST00000551261 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
LETMD1-229ENST00000551261 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
LETMD1-229ENST00000551261 RBM17Q96I25 401 aaKnown RBP17.27■□□□□ 0.36
LETMD1-229ENST00000551261 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
LETMD1-229ENST00000551261 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
LETMD1-229ENST00000551261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
LETMD1-229ENST00000551261 CHMLP26374 656 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 PDE6BP35913 854 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
LETMD1-229ENST00000551261 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
LETMD1-229ENST00000551261 CHRNDQ07001 517 aa17.25■□□□□ 0.35
LETMD1-229ENST00000551261 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
LETMD1-229ENST00000551261 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
LETMD1-229ENST00000551261 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
LETMD1-229ENST00000551261 IGSF3O75054 1194 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 BBOX1O75936 387 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 MMP10P09238 476 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
LETMD1-229ENST00000551261 RBM25P49756 843 aaKnown RBP17.24■□□□□ 0.35
LETMD1-229ENST00000551261 TIMM10P62072 90 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
LETMD1-229ENST00000551261 ESYT1Q9BSJ8 1104 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
LETMD1-229ENST00000551261 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
LETMD1-229ENST00000551261 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
LETMD1-229ENST00000551261 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
LETMD1-229ENST00000551261 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
LETMD1-229ENST00000551261 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
LETMD1-229ENST00000551261 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
LETMD1-229ENST00000551261 ZFYP08048 801 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-229ENST00000551261 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
LETMD1-229ENST00000551261 SNRKQ9NRH2 765 aa17.22■□□□□ 0.35
LETMD1-229ENST00000551261 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
LETMD1-229ENST00000551261 PAG1Q9NWQ8 432 aa17.22■□□□□ 0.35
LETMD1-229ENST00000551261 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
LETMD1-229ENST00000551261 SEMA3EO15041 775 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 SEC24BO95487 1268 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 NPR1P16066 1061 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 MCCP23508 829 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 TMED8Q6PL24 325 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-229ENST00000551261 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
LETMD1-229ENST00000551261 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.34
LETMD1-229ENST00000551261 XDHP47989 1333 aa17.21■□□□□ 0.34
LETMD1-229ENST00000551261 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
LETMD1-229ENST00000551261 SGSM2O43147 1006 aa17.2■□□□□ 0.34
LETMD1-229ENST00000551261 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
LETMD1-229ENST00000551261 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms