RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 LIMCH1Q9UPQ0 1083 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.56
SCN8A-206ENST00000550891 NUP98P52948 1817 aa18.58■□□□□ 0.56
SCN8A-206ENST00000550891 SLC27A2O14975 620 aa18.58■□□□□ 0.56
SCN8A-206ENST00000550891 U3KPZ7 1027 aaPredicted RBP18.58■□□□□ 0.56
SCN8A-206ENST00000550891 ADORA1P30542 326 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 AK2P54819 239 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 KCNQ4P56696 695 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 GJD4Q96KN9 370 aaPredicted RBP18.57■□□□□ 0.56
SCN8A-206ENST00000550891 TAF5LO75529 589 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 CUL4AQ13619 759 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 KRT32Q14532 448 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 HELLSQ9NRZ9 838 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 TRAK2O60296 914 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 IGHMBP2P38935 993 aaKnown RBP18.57■□□□□ 0.56
SCN8A-206ENST00000550891 VPS53Q5VIR6 699 aa18.57■□□□□ 0.56
SCN8A-206ENST00000550891 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
SCN8A-206ENST00000550891 AFF2P51816 1311 aa18.56■□□□□ 0.56
SCN8A-206ENST00000550891 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
SCN8A-206ENST00000550891 HSPA1LP34931 641 aa18.56■□□□□ 0.56
SCN8A-206ENST00000550891 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
SCN8A-206ENST00000550891 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
SCN8A-206ENST00000550891 PDE8BO95263 885 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 CPA1P15085 419 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 WASHC4Q2M389 1173 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 CCDC129Q6ZRS4 1044 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 ZSWIM6Q9HCJ5 1215 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.55■□□□□ 0.56
SCN8A-206ENST00000550891 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
SCN8A-206ENST00000550891 SEC62Q99442 399 aaKnown RBP18.55■□□□□ 0.56
SCN8A-206ENST00000550891 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 KCNB2Q92953 911 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 TTC14Q96N46 770 aa18.55■□□□□ 0.56
SCN8A-206ENST00000550891 TRPC5Q9UL62 973 aaPredicted RBP18.55■□□□□ 0.56
SCN8A-206ENST00000550891 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
SCN8A-206ENST00000550891 ZFYP08048 801 aaPredicted RBP18.54■□□□□ 0.56
SCN8A-206ENST00000550891 PUM3Q15397 648 aaKnown RBP18.54■□□□□ 0.56
SCN8A-206ENST00000550891 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
SCN8A-206ENST00000550891 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.56
SCN8A-206ENST00000550891 ZPR1O75312 459 aa18.54■□□□□ 0.56
SCN8A-206ENST00000550891 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
SCN8A-206ENST00000550891 SKOR2Q2VWA4 1001 aaPredicted RBP18.54■□□□□ 0.56
SCN8A-206ENST00000550891 GNPATO15228 680 aa18.53■□□□□ 0.56
SCN8A-206ENST00000550891 SLC5A1P13866 664 aa18.53■□□□□ 0.56
SCN8A-206ENST00000550891 LARP6Q9BRS8 491 aaKnown RBP18.53■□□□□ 0.56
SCN8A-206ENST00000550891 NPHP1O15259 732 aa18.53■□□□□ 0.56
SCN8A-206ENST00000550891 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
SCN8A-206ENST00000550891 NTSR2O95665 410 aa18.53■□□□□ 0.56
SCN8A-206ENST00000550891 HELBQ8NG08 1087 aaPredicted RBP18.53■□□□□ 0.56
SCN8A-206ENST00000550891 LPIN2Q92539 896 aa18.53■□□□□ 0.56
SCN8A-206ENST00000550891 GZF1Q9H116 711 aaPredicted RBP18.53■□□□□ 0.56
SCN8A-206ENST00000550891 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
SCN8A-206ENST00000550891 FGD1P98174 961 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 ZMYM1Q5SVZ6 1142 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.56
SCN8A-206ENST00000550891 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
SCN8A-206ENST00000550891 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 ZAP70P43403 619 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 FOXD4L5Q5VV16 416 aaPredicted RBP18.52■□□□□ 0.56
SCN8A-206ENST00000550891 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 FOXD4L4Q8WXT5 416 aaPredicted RBP18.52■□□□□ 0.56
SCN8A-206ENST00000550891 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
SCN8A-206ENST00000550891 CHGBP05060 677 aa18.52■□□□□ 0.55
SCN8A-206ENST00000550891 PKP1Q13835 747 aa18.52■□□□□ 0.55
SCN8A-206ENST00000550891 TTF1Q15361 905 aaPredicted RBP18.52■□□□□ 0.55
SCN8A-206ENST00000550891 PTF1AQ7RTS3 328 aa18.52■□□□□ 0.55
SCN8A-206ENST00000550891 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
SCN8A-206ENST00000550891 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
SCN8A-206ENST00000550891 MCTP1Q6DN14 999 aa18.51■□□□□ 0.55
SCN8A-206ENST00000550891 MYH3P11055 1940 aa18.51■□□□□ 0.55
SCN8A-206ENST00000550891 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
SCN8A-206ENST00000550891 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 MYH14Q7Z406 1995 aaKnown RBP18.5■□□□□ 0.55
SCN8A-206ENST00000550891 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 SETDB2Q96T68 719 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
SCN8A-206ENST00000550891 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
SCN8A-206ENST00000550891 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
SCN8A-206ENST00000550891 RPS6KB1P23443 525 aa18.49■□□□□ 0.55
SCN8A-206ENST00000550891 SCARF1Q14162 830 aa18.49■□□□□ 0.55
SCN8A-206ENST00000550891 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
SCN8A-206ENST00000550891 VGLL2Q8N8G2 317 aa18.49■□□□□ 0.55
SCN8A-206ENST00000550891 CCDC102BQ68D86 513 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 CLEC17AQ6ZS10 378 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 MAST3O60307 1309 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
SCN8A-206ENST00000550891 RPAP1Q9BWH6 1393 aaPredicted RBP18.48■□□□□ 0.55
SCN8A-206ENST00000550891 IDH1O75874 414 aaKnown RBP18.48■□□□□ 0.55
SCN8A-206ENST00000550891 SLFNL1Q499Z3 407 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms