RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 IER5Q5VY09 327 aa6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 DTX1Q86Y01 620 aa6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 SIX5Q8N196 739 aa6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 SMG9Q9H0W8 520 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 DKK1O94907 266 aa6.88□□□□□ -1.31
TSPAN8-205ENST00000550818 FAM69CQ0P6D2 419 aa6.88□□□□□ -1.31
TSPAN8-205ENST00000550818 BCS1LQ9Y276 419 aa6.88□□□□□ -1.31
TSPAN8-205ENST00000550818 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 GLB1P16278 677 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 GPLD1P80108 840 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 HIF1AQ16665 826 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 CCDC102BQ68D86 513 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
TSPAN8-205ENST00000550818 PRR19A6NJB7 356 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 TARSP26639 723 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 SEC13P55735 322 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 NFIAQ12857 509 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
TSPAN8-205ENST00000550818 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 M0R2N6 131 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 WNT11O96014 354 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 INPP5BP32019 993 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 HFE2Q6ZVN8 426 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 ARMC10Q8N2F6 343 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 TSEN2Q8NCE0 465 aaKnown RBP6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 IFT43Q96FT9 208 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 RBM19Q9Y4C8 960 aaKnown RBP6.85□□□□□ -1.31
TSPAN8-205ENST00000550818 DHX15O43143 795 aaKnown RBP6.84□□□□□ -1.31
TSPAN8-205ENST00000550818 GRIK1P39086 918 aa6.84□□□□□ -1.31
TSPAN8-205ENST00000550818 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
TSPAN8-205ENST00000550818 SSFA2P28290 1259 aa6.83□□□□□ -1.32
TSPAN8-205ENST00000550818 PHLDB3Q6NSJ2 640 aa6.83□□□□□ -1.32
TSPAN8-205ENST00000550818 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
TSPAN8-205ENST00000550818 C7orf69Q9H7B7 122 aa6.83□□□□□ -1.32
TSPAN8-205ENST00000550818 SASH3O75995 380 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 RARAP10276 462 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 EIF2AK2P19525 551 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 RTN1Q16799 776 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 RNF43Q68DV7 783 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 IL22RA1Q8N6P7 574 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 KRTAP4-11Q9BYQ6 195 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 SRA1Q9HD15 236 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 IVNS1ABPQ9Y6Y0 642 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 ATAD2Q6PL18 1390 aa6.82□□□□□ -1.32
TSPAN8-205ENST00000550818 C8AP07357 584 aa6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 EPB42P16452 691 aa6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 NRLP54845 237 aa6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
TSPAN8-205ENST00000550818 HMX2A2RU54 273 aa6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 TXNDC2Q86VQ3 553 aa6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 ABI1Q8IZP0 508 aa6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 SCG3Q8WXD2 468 aaKnown RBP6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 C11orf16Q9NQ32 467 aa6.8□□□□□ -1.32
TSPAN8-205ENST00000550818 J3QW42 95 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 WISP1O95388 367 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 IDH3AP50213 366 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 OCLNQ16625 522 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 GALNT11Q8NCW6 608 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 DCAF11Q8TEB1 546 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 CHMP7Q8WUX9 453 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
TSPAN8-205ENST00000550818 PRMT3O60678 531 aa6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 POU5F2Q8N7G0 328 aa6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 UTP4Q969X6 686 aaKnown RBP6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 FAM46AQ96IP4 442 aaKnown RBP6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 PRIMPOLQ96LW4 560 aa6.78□□□□□ -1.32
TSPAN8-205ENST00000550818 LOC102724428A0A0B4J2F2 783 aa6.77□□□□□ -1.33
TSPAN8-205ENST00000550818 SIK1P57059 783 aa6.77□□□□□ -1.33
TSPAN8-205ENST00000550818 GAS2L2Q8NHY3 880 aa6.77□□□□□ -1.33
TSPAN8-205ENST00000550818 KLK14Q9P0G3 267 aa6.77□□□□□ -1.33
TSPAN8-205ENST00000550818 TM4SF5O14894 197 aa6.76□□□□□ -1.33
TSPAN8-205ENST00000550818 LGR5O75473 907 aa6.76□□□□□ -1.33
TSPAN8-205ENST00000550818 WEE1P30291 646 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms