RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 ZNF837Q96EG3 531 aaPredicted RBP10.25□□□□□ -0.77
NPAS3-208ENST00000550662 SUV39H2Q9H5I1 410 aa10.25□□□□□ -0.77
NPAS3-208ENST00000550662 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
NPAS3-208ENST00000550662 MMP20O60882 483 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 POLR3DP05423 398 aaPredicted RBP10.24□□□□□ -0.77
NPAS3-208ENST00000550662 PSAPP07602 524 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 FANCCQ00597 558 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 KIAA0319Q5VV43 1072 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 FOXR1Q6PIV2 292 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 PI16Q6UXB8 463 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 KRT25Q7Z3Z0 450 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 VWA5B2Q8N398 1253 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 OSBPL7Q9BZF2 842 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
NPAS3-208ENST00000550662 CTSHP09668 335 aa10.23□□□□□ -0.77
NPAS3-208ENST00000550662 HOXD8P13378 290 aaPredicted RBP10.23□□□□□ -0.77
NPAS3-208ENST00000550662 ABHD17AQ96GS6 310 aa10.23□□□□□ -0.77
NPAS3-208ENST00000550662 TRERF1Q96PN7 1200 aa10.23□□□□□ -0.77
NPAS3-208ENST00000550662 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
NPAS3-208ENST00000550662 STRN4Q9NRL3 753 aa10.23□□□□□ -0.77
NPAS3-208ENST00000550662 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
NPAS3-208ENST00000550662 NFKB1P19838 968 aa10.22□□□□□ -0.77
NPAS3-208ENST00000550662 METTL16Q86W50 562 aaKnown RBP10.22□□□□□ -0.77
NPAS3-208ENST00000550662 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
NPAS3-208ENST00000550662 SALL4Q9UJQ4 1053 aa10.22□□□□□ -0.77
NPAS3-208ENST00000550662 CYP2E1P05181 493 aaPredicted RBP10.21□□□□□ -0.77
NPAS3-208ENST00000550662 PLAURQ03405 335 aa10.21□□□□□ -0.77
NPAS3-208ENST00000550662 HYAL2Q12891 473 aa10.21□□□□□ -0.77
NPAS3-208ENST00000550662 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.77
NPAS3-208ENST00000550662 GTPBP3Q969Y2 492 aaKnown RBP10.21□□□□□ -0.77
NPAS3-208ENST00000550662 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
NPAS3-208ENST00000550662 A0A1W2PP55 124 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 KIF4AO95239 1232 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 USP17L7P0C7H9 530 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 CD33P20138 364 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 FGFR3P22607 806 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 ST13P50502 369 aaKnown RBP10.2□□□□□ -0.78
NPAS3-208ENST00000550662 GRM2Q14416 872 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 TAF1CQ15572 869 aaPredicted RBP10.2□□□□□ -0.78
NPAS3-208ENST00000550662 ZNF385CQ66K41 422 aaPredicted RBP10.2□□□□□ -0.78
NPAS3-208ENST00000550662 NXPE4Q6UWF7 544 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 SV2AQ7L0J3 742 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 BHMTQ93088 406 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 EHD4Q9H223 541 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 KANSL3Q9P2N6 904 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
NPAS3-208ENST00000550662 CDC14CA4D256 554 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 SLURP2P0DP57 97 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 GSTT1P30711 240 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 NCAPG2Q86XI2 1143 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 SLC30A3Q99726 388 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 TGIF2Q9GZN2 237 aa10.19□□□□□ -0.78
NPAS3-208ENST00000550662 XRCC5P13010 732 aaKnown RBP10.18□□□□□ -0.78
NPAS3-208ENST00000550662 NRLP54845 237 aa10.18□□□□□ -0.78
NPAS3-208ENST00000550662 PCSK7Q16549 785 aa10.18□□□□□ -0.78
NPAS3-208ENST00000550662 PRPF40BQ6NWY9 871 aaKnown RBP10.18□□□□□ -0.78
NPAS3-208ENST00000550662 WHAMMQ8TF30 809 aa10.18□□□□□ -0.78
NPAS3-208ENST00000550662 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
NPAS3-208ENST00000550662 PTPN12Q05209 780 aaKnown RBP10.17□□□□□ -0.78
NPAS3-208ENST00000550662 RAD51AP2Q09MP3 1159 aa10.17□□□□□ -0.78
NPAS3-208ENST00000550662 PEAR1Q5VY43 1037 aaPredicted RBP10.17□□□□□ -0.78
NPAS3-208ENST00000550662 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
NPAS3-208ENST00000550662 ZFYVE1Q9HBF4 777 aa10.17□□□□□ -0.78
NPAS3-208ENST00000550662 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 NAALADL2Q58DX5 795 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 SPACA7Q96KW9 195 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 LATS2Q9NRM7 1088 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
NPAS3-208ENST00000550662 IGSF3O75054 1194 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 GPLD1P80108 840 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 GLIS3Q8NEA6 775 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 ANKRD24Q8TF21 1146 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 CCSER2Q9H7U1 834 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 LIN7BQ9HAP6 207 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 USP35Q9P2H5 1018 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
NPAS3-208ENST00000550662 CEP120Q8N960 986 aa10.14□□□□□ -0.79
NPAS3-208ENST00000550662 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
NPAS3-208ENST00000550662 SREK1Q8WXA9 508 aaKnown RBP10.14□□□□□ -0.79
NPAS3-208ENST00000550662 OSMRQ99650 979 aa10.14□□□□□ -0.79
NPAS3-208ENST00000550662 AVENQ9NQS1 362 aaPredicted RBP10.14□□□□□ -0.79
NPAS3-208ENST00000550662 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 CTBSQ01459 385 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
NPAS3-208ENST00000550662 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 RAB44Q7Z6P3 723 aaPredicted RBP10.13□□□□□ -0.79
NPAS3-208ENST00000550662 CCNJLQ8IV13 435 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 SVOPQ8N4V2 548 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 ZKSCAN3Q9BRR0 538 aa10.13□□□□□ -0.79
NPAS3-208ENST00000550662 NOC4LQ9BVI4 516 aaKnown RBP10.13□□□□□ -0.79
NPAS3-208ENST00000550662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
NPAS3-208ENST00000550662 LOC102724428A0A0B4J2F2 783 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 TMEM238LA0A1B0GVL6 79 aa10.12□□□□□ -0.79
NPAS3-208ENST00000550662 SIK1P57059 783 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms