RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 MAP3K10Q02779 954 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 CCINQ13939 588 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 UBAP2LQ14157 1087 aaKnown RBP7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 CRIPAKQ8N1N5 446 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 GSX2Q9BZM3 304 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 LNPKQ9C0E8 428 aa7.84□□□□□ -1.15
RAB3IP-213ENST00000550647 SENP3-EIF4A1A0A087X0R7 540 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 MAP3K6O95382 1288 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 HSP90B1P14625 803 aaKnown RBP7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 PAK2Q13177 524 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 ZFYVE1Q9HBF4 777 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 GPAMQ9HCL2 828 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 ABCB6Q9NP58 842 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 KCNQ5Q9NR82 932 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 DNMT3LQ9UJW3 386 aa7.83□□□□□ -1.16
RAB3IP-213ENST00000550647 SMARCA5O60264 1052 aaPredicted RBP7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 MMP20O60882 483 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 RLBP1P12271 317 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 SV2BQ7L1I2 683 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 SEC16BQ96JE7 1060 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 TCF12Q99081 682 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 DNAJC2Q99543 621 aaKnown RBP7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 EHD4Q9H223 541 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 COPRSQ9NQ92 184 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 PCDHGC4Q9Y5F7 938 aa7.82□□□□□ -1.16
RAB3IP-213ENST00000550647 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 FIGNL2A6NMB9 653 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 ATXN7O15265 892 aaPredicted RBP7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 CYP2E1P05181 493 aaPredicted RBP7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 THBS1P07996 1170 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 NDFIP2Q9NV92 336 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 KBTBD4Q9NVX7 518 aa7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 TTF2Q9UNY4 1162 aaKnown RBP7.81□□□□□ -1.16
RAB3IP-213ENST00000550647 SASH3O75995 380 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 BMP1P13497 986 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 TNP2Q05952 138 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 GIMAP6Q6P9H5 292 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 LATS2Q9NRM7 1088 aa7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 TLR7Q9NYK1 1049 aaKnown RBP7.8□□□□□ -1.16
RAB3IP-213ENST00000550647 ITPKAP23677 461 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 NBPF6Q5VWK0 638 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 KIAA0825Q8IV33 1275 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 NBPF4Q96M43 638 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 CNTNAP3BQ96NU0 1288 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 CNTNAP3Q9BZ76 1288 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 ZFATQ9P243 1243 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 KANSL3Q9P2N6 904 aa7.79□□□□□ -1.16
RAB3IP-213ENST00000550647 RARAP10276 462 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 TARSP26639 723 aaKnown RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 FCGRTP55899 365 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 COL9A2Q14055 689 aaPredicted RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 CCDC85BQ15834 202 aaPredicted RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 RELL1Q8IUW5 271 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 GMCL1Q96IK5 515 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 RHOVQ96L33 236 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 GAS2L1Q99501 681 aaPredicted RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 SPON2Q9BUD6 331 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 ADAMTS1Q9UHI8 967 aa7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.78□□□□□ -1.16
RAB3IP-213ENST00000550647 H7C1W4 665 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 STK10O94804 968 aaKnown RBP7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 PSAPP07602 524 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 HYAL2Q12891 473 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 CCDC144BQ3MJ40 725 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 RPS26P11Q5JNZ5 115 aaPredicted RBP7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 FAM182BQ5T319 152 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 CEP120Q8N960 986 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 ZKSCAN3Q9BRR0 538 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 CEP44Q9C0F1 390 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 STRIP2Q9ULQ0 834 aa7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
RAB3IP-213ENST00000550647 SLC35F4A4IF30 521 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 LCE2BO14633 110 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 GREM1O60565 184 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 EIF4A3P38919 411 aaKnown RBP7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 NRLP54845 237 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 PLAURQ03405 335 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 DZANK1Q9NVP4 752 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 MARK1Q9P0L2 795 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms