RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
VDR-208ENST00000550325 UHRF1BP1LA0JNW5 1464 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 TEFQ10587 303 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 DRC1Q96MC2 740 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
VDR-208ENST00000550325 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
VDR-208ENST00000550325 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 CCDC129Q6ZRS4 1044 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 TTC21BQ7Z4L5 1316 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 ZNF396Q96N95 335 aaPredicted RBP14.06□□□□□ -0.16
VDR-208ENST00000550325 MROH1Q8NDA8 1641 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
VDR-208ENST00000550325 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
VDR-208ENST00000550325 ZNF589Q86UQ0 364 aaPredicted RBP14.06□□□□□ -0.16
VDR-208ENST00000550325 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
VDR-208ENST00000550325 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 ATP1A3P13637 1013 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 MAP4K1Q92918 833 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 ADAM21Q9UKJ8 722 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
VDR-208ENST00000550325 FAM193AP78312 1265 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 NOM1Q5C9Z4 860 aaKnown RBP14.05□□□□□ -0.16
VDR-208ENST00000550325 RAB11FIP4Q86YS3 637 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 CCDC102AQ96A19 550 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
VDR-208ENST00000550325 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
VDR-208ENST00000550325 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 UBASH3AP57075 661 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 PPP2R3AQ06190 1150 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 CC2D1AQ6P1N0 951 aaPredicted RBP14.05□□□□□ -0.16
VDR-208ENST00000550325 PTPRMP28827 1452 aa14.05□□□□□ -0.16
VDR-208ENST00000550325 SLC3A2P08195 630 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 TLR7Q9NYK1 1049 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 CHPF2Q9P2E5 772 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 ZRANB2O95218 330 aaKnown RBP eCLIP14.04□□□□□ -0.16
VDR-208ENST00000550325 TBC1D8O95759 1140 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 APOBRQ0VD83 1088 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 DNAAF4Q8WXU2 420 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 MRPS27Q92552 414 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 ATP7BP35670 1465 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 FANCCQ00597 558 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
VDR-208ENST00000550325 KLHDC4Q8TBB5 520 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 PARD6BQ9BYG5 372 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 IMPACTQ9P2X3 320 aa14.04□□□□□ -0.16
VDR-208ENST00000550325 CCP110O43303 1012 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 TADA3O75528 432 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 CHGBP05060 677 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 TPM1P09493 284 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 NDUFA8P51970 172 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
VDR-208ENST00000550325 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 EFCAB8A8MWE9 144 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 CCDC93Q567U6 631 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 CRB1P82279 1406 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 SCRN1Q12765 414 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 POLA2Q14181 598 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 WWC2Q6AWC2 1192 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
VDR-208ENST00000550325 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
VDR-208ENST00000550325 OSBPL5Q9H0X9 879 aaPredicted RBP14.03□□□□□ -0.16
VDR-208ENST00000550325 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.16
VDR-208ENST00000550325 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.16
VDR-208ENST00000550325 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.16
VDR-208ENST00000550325 PDE11AQ9HCR9 933 aa14.02□□□□□ -0.16
VDR-208ENST00000550325 HIP1O00291 1037 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 DESI2Q9BSY9 194 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 PCDHA7Q9UN72 937 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
VDR-208ENST00000550325 TTC31Q49AM3 519 aaPredicted RBP14.02□□□□□ -0.17
VDR-208ENST00000550325 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.17
VDR-208ENST00000550325 ZSCAN12O43309 604 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
VDR-208ENST00000550325 SRLQ86TD4 932 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 E2F4Q16254 413 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 FBXO18Q8NFZ0 1043 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 EAF2Q96CJ1 260 aaPredicted RBP14.01□□□□□ -0.17
VDR-208ENST00000550325 WDR24Q96S15 920 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
VDR-208ENST00000550325 KIAA1468Q9P260 1216 aa14.01□□□□□ -0.17
VDR-208ENST00000550325 MARCKSP29966 332 aaPredicted RBP14.01□□□□□ -0.17
VDR-208ENST00000550325 LONRF2Q1L5Z9 754 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms