RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 ERFEQ4G0M1 354 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 ANKRD18AQ8IVF6 992 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 VGLL2Q8N8G2 317 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 LPIN2Q92539 896 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
CACNB3-212ENST00000549971 PUS3Q9BZE2 481 aaKnown RBP15.23■□□□□ 0.03
CACNB3-212ENST00000549971 TLR7Q9NYK1 1049 aaKnown RBP15.23■□□□□ 0.03
CACNB3-212ENST00000549971 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
CACNB3-212ENST00000549971 NPHP1O15259 732 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 SLC5A1P13866 664 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 ANAPC15P60006 121 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 CNBD1Q8NA66 436 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
CACNB3-212ENST00000549971 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-212ENST00000549971 SGSM2O43147 1006 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 UQCRFS1P1P0C7P4 283 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 GYS1P13807 737 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 ST5P78524 1137 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 NFIXQ14938 502 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 PROM2Q8N271 834 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 FSD1Q9BTV5 496 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 SNRKQ9NRH2 765 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 BSDC1Q9NW68 430 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-212ENST00000549971 TFCP2L1Q9NZI6 479 aa15.21■□□□□ 0.03
CACNB3-212ENST00000549971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.21■□□□□ 0.03
CACNB3-212ENST00000549971 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
CACNB3-212ENST00000549971 IFIT1P09914 478 aaKnown RBP15.2■□□□□ 0.02
CACNB3-212ENST00000549971 RABEP1Q15276 862 aa15.2■□□□□ 0.02
CACNB3-212ENST00000549971 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
CACNB3-212ENST00000549971 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-212ENST00000549971 FGFR2P21802 821 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 TM4SF1P30408 202 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 TIMM10P62072 90 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-212ENST00000549971 DDX46Q7L014 1031 aaKnown RBP15.19■□□□□ 0.02
CACNB3-212ENST00000549971 KBTBD3Q8NAB2 608 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 SNX21Q969T3 373 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
CACNB3-212ENST00000549971 ZBTB22O15209 634 aa15.18■□□□□ 0.02
CACNB3-212ENST00000549971 SF3B2Q13435 895 aaKnown RBP15.18■□□□□ 0.02
CACNB3-212ENST00000549971 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
CACNB3-212ENST00000549971 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
CACNB3-212ENST00000549971 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 MAP4K4O95819 1239 aaPredicted RBP15.17■□□□□ 0.02
CACNB3-212ENST00000549971 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 UPF1Q92900 1129 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNB3-212ENST00000549971 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
CACNB3-212ENST00000549971 IGSF3O75054 1194 aa15.16■□□□□ 0.02
CACNB3-212ENST00000549971 SERPINB2P05120 415 aa15.16■□□□□ 0.02
CACNB3-212ENST00000549971 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-212ENST00000549971 BAG6P46379 1132 aa15.16■□□□□ 0.02
CACNB3-212ENST00000549971 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
CACNB3-212ENST00000549971 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
CACNB3-212ENST00000549971 CHRNDQ07001 517 aa15.15■□□□□ 0.02
CACNB3-212ENST00000549971 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
CACNB3-212ENST00000549971 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
CACNB3-212ENST00000549971 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
CACNB3-212ENST00000549971 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB3-212ENST00000549971 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
CACNB3-212ENST00000549971 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
CACNB3-212ENST00000549971 MED23Q9ULK4 1368 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 ST18O60284 1047 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 HSPA4P34932 840 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 MCM2P49736 904 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 GRAPQ13588 217 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-212ENST00000549971 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-212ENST00000549971 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.01
CACNB3-212ENST00000549971 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
CACNB3-212ENST00000549971 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-212ENST00000549971 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
CACNB3-212ENST00000549971 GOLIM4O00461 696 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 SEMA3EO15041 775 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-212ENST00000549971 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 RNF20Q5VTR2 975 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
CACNB3-212ENST00000549971 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
CACNB3-212ENST00000549971 CCDC171Q6TFL3 1326 aa15.13■□□□□ 0.01
CACNB3-212ENST00000549971 ADORA1P30542 326 aa15.12■□□□□ 0.01
CACNB3-212ENST00000549971 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
CACNB3-212ENST00000549971 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
CACNB3-212ENST00000549971 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms