RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 SAP130Q9H0E3 1048 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 RFX1P22670 979 aa9.21□□□□□ -0.94
CCDC38-208ENST00000549876 FAM26DQ5JW98 314 aa9.21□□□□□ -0.94
CCDC38-208ENST00000549876 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.94
CCDC38-208ENST00000549876 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
CCDC38-208ENST00000549876 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
CCDC38-208ENST00000549876 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
CCDC38-208ENST00000549876 NLRP13Q86W25 1043 aa9.2□□□□□ -0.94
CCDC38-208ENST00000549876 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
CCDC38-208ENST00000549876 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
CCDC38-208ENST00000549876 PRMT3O60678 531 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 FSTP19883 344 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
CCDC38-208ENST00000549876 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 CACTIN-AS1Q8N1I8 211 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
CCDC38-208ENST00000549876 ZMIZ1Q9ULJ6 1067 aa9.19□□□□□ -0.94
CCDC38-208ENST00000549876 TNFRSF10BO14763 440 aa9.18□□□□□ -0.94
CCDC38-208ENST00000549876 ELOAQ14241 798 aaKnown RBP9.18□□□□□ -0.94
CCDC38-208ENST00000549876 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
CCDC38-208ENST00000549876 DCAF11Q8TEB1 546 aa9.17□□□□□ -0.94
CCDC38-208ENST00000549876 COL13A1Q5TAT6 717 aaPredicted RBP9.16□□□□□ -0.94
CCDC38-208ENST00000549876 MUC3BQ9H195 1237 aa9.16□□□□□ -0.94
CCDC38-208ENST00000549876 PPME1Q9Y570 386 aa9.16□□□□□ -0.94
CCDC38-208ENST00000549876 CAPN12Q6ZSI9 719 aa9.15□□□□□ -0.94
CCDC38-208ENST00000549876 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
CCDC38-208ENST00000549876 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.94
CCDC38-208ENST00000549876 GALNT11Q8NCW6 608 aa9.15□□□□□ -0.94
CCDC38-208ENST00000549876 STK32AQ8WU08 396 aa9.15□□□□□ -0.94
CCDC38-208ENST00000549876 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
CCDC38-208ENST00000549876 TM4SF5O14894 197 aa9.14□□□□□ -0.95
CCDC38-208ENST00000549876 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
CCDC38-208ENST00000549876 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
CCDC38-208ENST00000549876 ATP11AP98196 1134 aa9.13□□□□□ -0.95
CCDC38-208ENST00000549876 HYAL2Q12891 473 aa9.13□□□□□ -0.95
CCDC38-208ENST00000549876 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-208ENST00000549876 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
CCDC38-208ENST00000549876 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-208ENST00000549876 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 KIF4AO95239 1232 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 GLB1P16278 677 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 LCE3BQ5TA77 95 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
CCDC38-208ENST00000549876 WISP1O95388 367 aa9.11□□□□□ -0.95
CCDC38-208ENST00000549876 CD97P48960 835 aa9.11□□□□□ -0.95
CCDC38-208ENST00000549876 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
CCDC38-208ENST00000549876 SSTR4P31391 388 aa9.1□□□□□ -0.95
CCDC38-208ENST00000549876 ZAP70P43403 619 aa9.1□□□□□ -0.95
CCDC38-208ENST00000549876 CEP135Q66GS9 1140 aa9.1□□□□□ -0.95
CCDC38-208ENST00000549876 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
CCDC38-208ENST00000549876 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
CCDC38-208ENST00000549876 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
CCDC38-208ENST00000549876 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 CDC27P30260 824 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 CD68P34810 354 aaPredicted RBP9.09□□□□□ -0.95
CCDC38-208ENST00000549876 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
CCDC38-208ENST00000549876 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 SPACA7Q96KW9 195 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 LACRTQ9GZZ8 138 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
CCDC38-208ENST00000549876 FNDC3AQ9Y2H6 1198 aaKnown RBP9.09□□□□□ -0.95
CCDC38-208ENST00000549876 ZBTB39O15060 712 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 GSC2O15499 205 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC38-208ENST00000549876 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
CCDC38-208ENST00000549876 MCTP1Q6DN14 999 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 STIM2Q9P246 746 aa9.08□□□□□ -0.96
CCDC38-208ENST00000549876 ATG7O95352 703 aa9.07□□□□□ -0.96
CCDC38-208ENST00000549876 MED26O95402 600 aa9.07□□□□□ -0.96
CCDC38-208ENST00000549876 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
CCDC38-208ENST00000549876 CEP120Q8N960 986 aa9.07□□□□□ -0.96
CCDC38-208ENST00000549876 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
CCDC38-208ENST00000549876 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
CCDC38-208ENST00000549876 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 FSCN2O14926 492 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 SCNN1AP37088 669 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
CCDC38-208ENST00000549876 CARD10Q9BWT7 1032 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 PBX4Q9BYU1 374 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 CEP41Q9BYV8 373 aa9.06□□□□□ -0.96
CCDC38-208ENST00000549876 COL17A1Q9UMD9 1497 aaPredicted RBP9.05□□□□□ -0.96
CCDC38-208ENST00000549876 UVSSAQ2YD98 709 aa9.05□□□□□ -0.96
CCDC38-208ENST00000549876 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
CCDC38-208ENST00000549876 ADAM11O75078 769 aa9.04□□□□□ -0.96
CCDC38-208ENST00000549876 TGFB1P01137 390 aa9.04□□□□□ -0.96
CCDC38-208ENST00000549876 EPHA1P21709 976 aa9.04□□□□□ -0.96
CCDC38-208ENST00000549876 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
CCDC38-208ENST00000549876 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms