RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PUM3Q15397 648 aaKnown RBP10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 FMNL3Q8IVF7 1028 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 PAG1Q9NWQ8 432 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 RNF17Q9BXT8 1623 aaKnown RBP10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 USP21Q9UK80 565 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 SPHKAPQ2M3C7 1700 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 HSP90B2PQ58FF3 399 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 CAGE1Q8TC20 777 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 CCDC85AQ96PX6 553 aaPredicted RBP10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 DEF6Q9H4E7 631 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 CCAR2Q8N163 923 aaKnown RBP10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
PPFIA2-216ENST00000549396 EYA2O00167 538 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 SNX21Q969T3 373 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 CCDC172P0C7W6 258 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 JAKMIP3Q5VZ66 844 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 LTKP29376 864 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
PPFIA2-216ENST00000549396 LZTS2Q9BRK4 669 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 USP16Q9Y5T5 823 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 SLC4A4Q9Y6R1 1079 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 ZBTB43O43298 467 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 SMARCA5O60264 1052 aaPredicted RBP10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 SMC5Q8IY18 1101 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 KCNG4Q8TDN1 519 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 RNF123Q5XPI4 1314 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 GNPATO15228 680 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 SSFA2P28290 1259 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 TANGO6Q9C0B7 1094 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 C6orf50Q9HD87 102 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 KDRP35968 1356 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 KIF4AO95239 1232 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 MCM4P33991 863 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 IFIT1BQ5T764 474 aaKnown RBP10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 CCDC83Q8IWF9 413 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 MEIS3Q99687 375 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
PPFIA2-216ENST00000549396 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ACSBG1Q96GR2 724 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 UVSSAQ2YD98 709 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 FAM43AQ8N2R8 423 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 TNPO1Q92973 898 aaKnown RBP10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 GGA1Q9UJY5 639 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 MED14O60244 1454 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 RTN1Q16799 776 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ZBTB40Q9NUA8 1239 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 CCDC171Q6TFL3 1326 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 MCM3P25205 808 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 GNA11P29992 359 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 SPAG1Q07617 926 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 TMEM87BQ96K49 555 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 GOLGA6L9A6NEM1 432 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 H0YIN7 160 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ZSCAN12O43309 604 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 DKC1O60832 514 aaKnown RBP eCLIP10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ERLIN1O75477 346 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 ZHX3Q9H4I2 956 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
PPFIA2-216ENST00000549396 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 LPIN2Q92539 896 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 PHKG2P15735 406 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 SLC39A6Q13433 755 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 INTS4Q96HW7 963 aaKnown RBP10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 ORC3Q9UBD5 711 aaPredicted RBP10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 SEMA3EO15041 775 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 IGSF3O75054 1194 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 TBC1D32Q96NH3 1257 aa10.65□□□□□ -0.7
PPFIA2-216ENST00000549396 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 GSDMDP57764 484 aa10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 PTCH1Q13635 1447 aa10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 BRAPQ7Z569 592 aa10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 ZNF592Q92610 1267 aa10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.71
PPFIA2-216ENST00000549396 SSH2Q76I76 1423 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 WDR17Q8IZU2 1322 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 IGSF1Q8N6C5 1336 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 TULP4Q9NRJ4 1543 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 MATR3P43243 847 aaKnown RBP eCLIP10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 KCNG1Q9UIX4 513 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 STX6O43752 255 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 EIF6P56537 245 aaKnown RBP10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 SLC9C2Q5TAH2 1124 aa10.64□□□□□ -0.71
PPFIA2-216ENST00000549396 C16orf71Q8IYS4 520 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms