RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 AAMPQ13685 434 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 PRRT3Q5FWE3 981 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 NUDT8Q8WV74 236 aa9.22□□□□□ -0.93
USP15-213ENST00000549268 ABI2Q9NYB9 513 aaPredicted RBP9.22□□□□□ -0.93
USP15-213ENST00000549268 H3BRB1 525 aa9.21□□□□□ -0.94
USP15-213ENST00000549268 TTC39BQ5VTQ0 682 aaPredicted RBP9.21□□□□□ -0.94
USP15-213ENST00000549268 EDEM1Q92611 657 aa9.21□□□□□ -0.94
USP15-213ENST00000549268 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.94
USP15-213ENST00000549268 ICMTO60725 284 aa9.2□□□□□ -0.94
USP15-213ENST00000549268 USP5P45974 858 aa9.2□□□□□ -0.94
USP15-213ENST00000549268 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
USP15-213ENST00000549268 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
USP15-213ENST00000549268 GRIK5Q16478 980 aa9.2□□□□□ -0.94
USP15-213ENST00000549268 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
USP15-213ENST00000549268 ELP3Q9H9T3 547 aa9.2□□□□□ -0.94
USP15-213ENST00000549268 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
USP15-213ENST00000549268 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
USP15-213ENST00000549268 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
USP15-213ENST00000549268 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
USP15-213ENST00000549268 SOWAHDA6NJG2 315 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 MSTNO14793 375 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 KIF4AO95239 1232 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 GHRHP01286 108 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 HYAL2Q12891 473 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 CACTIN-AS1Q8N1I8 211 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 DTWD1Q8N5C7 304 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 TTC16Q8NEE8 873 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 PLD4Q96BZ4 506 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
USP15-213ENST00000549268 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
USP15-213ENST00000549268 GGNBP2Q9H3C7 697 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
USP15-213ENST00000549268 J3QW42 95 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 FZD6O60353 706 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 EHHADHQ08426 723 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 CD163Q86VB7 1156 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 SPOCK3Q9BQ16 436 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 POLIQ9UNA4 740 aa9.17□□□□□ -0.94
USP15-213ENST00000549268 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
USP15-213ENST00000549268 PROCP04070 461 aa9.16□□□□□ -0.94
USP15-213ENST00000549268 RAC1P63000 192 aa9.16□□□□□ -0.94
USP15-213ENST00000549268 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
USP15-213ENST00000549268 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
USP15-213ENST00000549268 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 ELNP15502 786 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 ECM1Q16610 540 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.94
USP15-213ENST00000549268 PMEPA1Q969W9 287 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 SPACA7Q96KW9 195 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 NACC1Q96RE7 527 aa9.15□□□□□ -0.94
USP15-213ENST00000549268 CHRNA4P43681 627 aa9.14□□□□□ -0.95
USP15-213ENST00000549268 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
USP15-213ENST00000549268 COL13A1Q5TAT6 717 aaPredicted RBP9.14□□□□□ -0.95
USP15-213ENST00000549268 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
USP15-213ENST00000549268 GJD3Q8N144 294 aa9.14□□□□□ -0.95
USP15-213ENST00000549268 CNTN3Q9P232 1028 aa9.14□□□□□ -0.95
USP15-213ENST00000549268 APBA3O96018 575 aa9.13□□□□□ -0.95
USP15-213ENST00000549268 DMRTC2Q8IXT2 367 aaPredicted RBP9.13□□□□□ -0.95
USP15-213ENST00000549268 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
USP15-213ENST00000549268 CEP120Q8N960 986 aa9.13□□□□□ -0.95
USP15-213ENST00000549268 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 BAG6P46379 1132 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 ARHGAP4P98171 946 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 FBXO11Q86XK2 927 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
USP15-213ENST00000549268 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 C9orf172C9J069 976 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 CYP2E1P05181 493 aaPredicted RBP9.11□□□□□ -0.95
USP15-213ENST00000549268 CES1P23141 567 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 KRTAP4-6Q9BYQ5 205 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 MUC3BQ9H195 1237 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 CHRDQ9H2X0 955 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
USP15-213ENST00000549268 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
USP15-213ENST00000549268 TNFRSF21O75509 655 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.956e-16■□□□□ 10.1
USP15-213ENST00000549268 NCAPG2Q86XI2 1143 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 LENG1Q96BZ8 264 aaPredicted RBP9.1□□□□□ -0.95
USP15-213ENST00000549268 CITED4Q96RK1 184 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 PBX4Q9BYU1 374 aa9.1□□□□□ -0.95
USP15-213ENST00000549268 A6NHS1 94 aa9.09□□□□□ -0.95
USP15-213ENST00000549268 GRIK4Q16099 956 aa9.09□□□□□ -0.95
USP15-213ENST00000549268 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
USP15-213ENST00000549268 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
USP15-213ENST00000549268 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
USP15-213ENST00000549268 NDUFB5O43674 189 aa9.08□□□□□ -0.96
USP15-213ENST00000549268 SELPP16109 830 aa9.08□□□□□ -0.96
USP15-213ENST00000549268 MAPK1P28482 360 aa9.08□□□□□ -0.96
USP15-213ENST00000549268 NRG1Q02297 640 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms