RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
RFX4-208ENST00000549040 CICQ96RK0 1608 aaPredicted RBP10.36□□□□□ -0.75
RFX4-208ENST00000549040 FLIIQ13045 1269 aa10.35□□□□□ -0.75
RFX4-208ENST00000549040 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
RFX4-208ENST00000549040 C20orf194Q5TEA3 1177 aa10.35□□□□□ -0.75
RFX4-208ENST00000549040 ARHGAP45Q92619 1136 aa10.35□□□□□ -0.75
RFX4-208ENST00000549040 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
RFX4-208ENST00000549040 RLBP1P12271 317 aa10.34□□□□□ -0.75
RFX4-208ENST00000549040 TRIM27P14373 513 aa10.34□□□□□ -0.75
RFX4-208ENST00000549040 GCGRP47871 477 aa10.34□□□□□ -0.75
RFX4-208ENST00000549040 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
RFX4-208ENST00000549040 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
RFX4-208ENST00000549040 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
RFX4-208ENST00000549040 F6X3S4 739 aa10.33□□□□□ -0.76
RFX4-208ENST00000549040 RRP1P56182 461 aaKnown RBP10.33□□□□□ -0.76
RFX4-208ENST00000549040 HLFQ16534 295 aa10.33□□□□□ -0.76
RFX4-208ENST00000549040 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
RFX4-208ENST00000549040 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
RFX4-208ENST00000549040 ADCY9O60503 1353 aa10.33□□□□□ -0.76
RFX4-208ENST00000549040 MYH14Q7Z406 1995 aaKnown RBP10.33□□□□□ -0.76
RFX4-208ENST00000549040 PTPRCP08575 1304 aa10.33□□□□□ -0.76
RFX4-208ENST00000549040 RREB1Q92766 1687 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 PI4KAP2A4QPH2 592 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 CAMTA2O94983 1202 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 PI4KAP1Q8N8J0 262 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 PLBD2Q8NHP8 589 aa10.32□□□□□ -0.76
RFX4-208ENST00000549040 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
RFX4-208ENST00000549040 COL5A3P25940 1745 aaPredicted RBP10.32□□□□□ -0.76
RFX4-208ENST00000549040 IPO8O15397 1037 aaKnown RBP10.31□□□□□ -0.76
RFX4-208ENST00000549040 NR1I2O75469 434 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 CLCN1P35523 988 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 SLC15A2Q16348 729 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
RFX4-208ENST00000549040 PANK1Q8TE04 598 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 AK7Q96M32 723 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 MAP3K2Q9Y2U5 619 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
RFX4-208ENST00000549040 C4BP0C0L5 1744 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 ERVV-1B6SEH8 477 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 CD46P15529 392 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 SSFA2P28290 1259 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 FKBP5Q13451 457 aaPredicted RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 BEND3Q5T5X7 828 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 INTS3Q68E01 1043 aaKnown RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 PPP1R18Q6NYC8 613 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 DNAAF4Q8WXU2 420 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 METTL22Q9BUU2 404 aaPredicted RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 ZBTB3Q9H5J0 574 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 GPCPD1Q9NPB8 672 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 TFCP2L1Q9NZI6 479 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 SRP68Q9UHB9 627 aaKnown RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 NARFQ9UHQ1 456 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
RFX4-208ENST00000549040 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 ABCC4O15439 1325 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 PNPLA7Q6ZV29 1317 aa10.3□□□□□ -0.76
RFX4-208ENST00000549040 RGPD3A6NKT7 1758 aaPredicted RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 COL15A1P39059 1388 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 FUT2Q10981 343 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 PDE3AQ14432 1141 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 TMEM57Q8N5G2 664 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 TMUB1Q9BVT8 246 aa10.29□□□□□ -0.76
RFX4-208ENST00000549040 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.29□□□□□ -0.76
RFX4-208ENST00000549040 A0A087WZG4 1122 aa10.28□□□□□ -0.76
RFX4-208ENST00000549040 DDX58O95786 925 aaKnown RBP10.28□□□□□ -0.76
RFX4-208ENST00000549040 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
RFX4-208ENST00000549040 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
RFX4-208ENST00000549040 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
RFX4-208ENST00000549040 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
RFX4-208ENST00000549040 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
RFX4-208ENST00000549040 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
RFX4-208ENST00000549040 GYS1P13807 737 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 RFC4P35249 363 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 GGCXP38435 758 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 IRX6P78412 446 aaPredicted RBP10.27□□□□□ -0.77
RFX4-208ENST00000549040 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.77
RFX4-208ENST00000549040 USPL1Q5W0Q7 1092 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 SLC4A10Q6U841 1118 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 CLEC4GQ6UXB4 293 aa10.27□□□□□ -0.77
RFX4-208ENST00000549040 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
RFX4-208ENST00000549040 ARXQ96QS3 562 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms