RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 MRFAP1L1Q96HT8 127 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 COL15A1P39059 1388 aa16.14■□□□□ 0.17
HDAC7-228ENST00000548938 TAF5LO75529 589 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 CAVIN2O95810 425 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 SKILP12757 684 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 FOSBP53539 338 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
HDAC7-228ENST00000548938 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 NYAP1Q6ZVC0 841 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 RBM6P78332 1123 aaKnown RBP16.13■□□□□ 0.17
HDAC7-228ENST00000548938 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-228ENST00000548938 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 FILIP1Q7Z7B0 1213 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-228ENST00000548938 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
HDAC7-228ENST00000548938 GRM8O00222 908 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
HDAC7-228ENST00000548938 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 STX1AQ16623 288 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 ANKRD24Q8TF21 1146 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 TRMT1Q9NXH9 659 aaKnown RBP16.12■□□□□ 0.17
HDAC7-228ENST00000548938 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 CCZ1BP86790 482 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 CCZ1P86791 482 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-228ENST00000548938 Q6ZUG5 572 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
HDAC7-228ENST00000548938 CHGBP05060 677 aa16.11■□□□□ 0.17
HDAC7-228ENST00000548938 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
HDAC7-228ENST00000548938 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
HDAC7-228ENST00000548938 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
HDAC7-228ENST00000548938 ADD1P35611 737 aaKnown RBP16.11■□□□□ 0.17
HDAC7-228ENST00000548938 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-228ENST00000548938 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
HDAC7-228ENST00000548938 BECN2A8MW95 431 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 NEMFO60524 1076 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 ZNF397Q8NF99 534 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-228ENST00000548938 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-228ENST00000548938 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 ERBB3P21860 1342 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 SCRN1Q12765 414 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 KRT32Q14532 448 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 CCDC129Q6ZRS4 1044 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
HDAC7-228ENST00000548938 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 ELF2Q15723 593 aa16.1■□□□□ 0.17
HDAC7-228ENST00000548938 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-228ENST00000548938 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
HDAC7-228ENST00000548938 FBXO38Q6PIJ6 1188 aa16.09■□□□□ 0.17
HDAC7-228ENST00000548938 PXDNQ92626 1479 aa16.09■□□□□ 0.17
HDAC7-228ENST00000548938 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
HDAC7-228ENST00000548938 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
HDAC7-228ENST00000548938 CCAR2Q8N163 923 aaKnown RBP16.09■□□□□ 0.17
HDAC7-228ENST00000548938 FBXW7Q969H0 707 aa16.09■□□□□ 0.17
HDAC7-228ENST00000548938 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.17
HDAC7-228ENST00000548938 CTAGE5O15320 804 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 KRT222Q8N1A0 295 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 USP28Q96RU2 1077 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
HDAC7-228ENST00000548938 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 UTYO14607 1347 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 CYP21A2P08686 494 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 CCDC73Q6ZRK6 1079 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 AOPEPQ8N6M6 819 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.16
HDAC7-228ENST00000548938 KINO60870 393 aaKnown RBP16.07■□□□□ 0.16
HDAC7-228ENST00000548938 ERO1AQ96HE7 468 aa16.07■□□□□ 0.16
HDAC7-228ENST00000548938 ZNF609O15014 1411 aa16.07■□□□□ 0.16
HDAC7-228ENST00000548938 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
HDAC7-228ENST00000548938 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
HDAC7-228ENST00000548938 SLAIN2Q9P270 581 aa16.07■□□□□ 0.16
HDAC7-228ENST00000548938 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 TERF2Q15554 542 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 DBNLQ9UJU6 430 aaKnown RBP16.06■□□□□ 0.16
HDAC7-228ENST00000548938 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 MRC1P22897 1456 aa16.06■□□□□ 0.16
HDAC7-228ENST00000548938 PTPDC1A2A3K4 754 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
HDAC7-228ENST00000548938 FAM160A1Q05DH4 1040 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms