RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 NKX1-1Q15270 411 aaPredicted RBP25.57■■□□□ 1.68
CACNB3-205ENST00000547392 CCDC191Q8NCU4 936 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 LLPHQ9BRT6 129 aaKnown RBP25.57■■□□□ 1.68
CACNB3-205ENST00000547392 LAMA4Q16363 1823 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 TTLL7Q6ZT98 887 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 BRINP3Q76B58 766 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
CACNB3-205ENST00000547392 NUP62CLQ9H1M0 184 aa25.57■■□□□ 1.68
CACNB3-205ENST00000547392 CIAO1O76071 339 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 FAM173BQ6P4H8 233 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 SMARCC2Q8TAQ2 1214 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 LEO1Q8WVC0 666 aaPredicted RBP25.56■■□□□ 1.68
CACNB3-205ENST00000547392 PAG1Q9NWQ8 432 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 LIG1P18858 919 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 RESTQ13127 1097 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 HSP90AA2PQ14568 343 aaPredicted RBP25.56■■□□□ 1.68
CACNB3-205ENST00000547392 MAP3K11Q16584 847 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 SPATA32Q96LK8 384 aa25.56■■□□□ 1.68
CACNB3-205ENST00000547392 ZMYM1Q5SVZ6 1142 aa25.55■■□□□ 1.68
CACNB3-205ENST00000547392 DDX19AQ9NUU7 478 aaKnown RBP25.55■■□□□ 1.68
CACNB3-205ENST00000547392 EYA2O00167 538 aa25.55■■□□□ 1.68
CACNB3-205ENST00000547392 PFKFB2O60825 505 aa25.55■■□□□ 1.68
CACNB3-205ENST00000547392 CHGBP05060 677 aa25.55■■□□□ 1.68
CACNB3-205ENST00000547392 RBM43Q6ZSC3 357 aaKnown RBP25.55■■□□□ 1.68
CACNB3-205ENST00000547392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.55■■□□□ 1.68
CACNB3-205ENST00000547392 ZSCAN16Q9H4T2 348 aaPredicted RBP25.55■■□□□ 1.68
CACNB3-205ENST00000547392 JAK2O60674 1132 aa25.54■■□□□ 1.68
CACNB3-205ENST00000547392 STOX1Q6ZVD7 989 aa25.54■■□□□ 1.68
CACNB3-205ENST00000547392 DHX32Q7L7V1 743 aaKnown RBP25.54■■□□□ 1.68
CACNB3-205ENST00000547392 PIBF1Q8WXW3 757 aa25.54■■□□□ 1.68
CACNB3-205ENST00000547392 AGXT2Q9BYV1 514 aa25.54■■□□□ 1.68
CACNB3-205ENST00000547392 CHMP3Q9Y3E7 222 aa25.53■■□□□ 1.68
CACNB3-205ENST00000547392 TNS2Q63HR2 1409 aa25.53■■□□□ 1.68
CACNB3-205ENST00000547392 BRF1Q92994 677 aa25.53■■□□□ 1.68
CACNB3-205ENST00000547392 NEUROD6Q96NK8 337 aa25.53■■□□□ 1.68
CACNB3-205ENST00000547392 GOLIM4O00461 696 aa25.52■■□□□ 1.68
CACNB3-205ENST00000547392 FAM200AQ8TCP9 573 aa25.52■■□□□ 1.68
CACNB3-205ENST00000547392 EXOSC10Q01780 885 aaKnown RBP25.52■■□□□ 1.68
CACNB3-205ENST00000547392 SASS6Q6UVJ0 657 aa25.52■■□□□ 1.68
CACNB3-205ENST00000547392 TFIP11Q9UBB9 837 aaKnown RBP25.52■■□□□ 1.68
CACNB3-205ENST00000547392 GOLGA6L4A6NEF3 574 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 A1BGP04217 495 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 TPM3P06753 285 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 HSP90B1P14625 803 aaKnown RBP25.51■■□□□ 1.67
CACNB3-205ENST00000547392 SCRN1Q12765 414 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 CLSTN2Q9H4D0 955 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 TIMM10P62072 90 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 TYRO3Q06418 890 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 MRVI1Q9Y6F6 885 aa25.51■■□□□ 1.67
CACNB3-205ENST00000547392 AP5Z1O43299 807 aa25.5■■□□□ 1.67
CACNB3-205ENST00000547392 DACT1Q9NYF0 836 aa25.5■■□□□ 1.67
CACNB3-205ENST00000547392 NAA16Q6N069 864 aaPredicted RBP25.49■■□□□ 1.67
CACNB3-205ENST00000547392 TNMDQ9H2S6 317 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 SLAIN2Q9P270 581 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 FBXO3Q9UK99 471 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 MYH15Q9Y2K3 1946 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 COL5A2P05997 1499 aaPredicted RBP25.49■■□□□ 1.67
CACNB3-205ENST00000547392 RNF113AO15541 343 aaKnown RBP25.49■■□□□ 1.67
CACNB3-205ENST00000547392 PGBD1Q96JS3 809 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 ISCA1Q9BUE6 129 aa25.49■■□□□ 1.67
CACNB3-205ENST00000547392 HMGN5P82970 282 aaKnown RBP25.48■■□□□ 1.67
CACNB3-205ENST00000547392 LRRC24Q50LG9 513 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 NSUN7Q8NE18 718 aaKnown RBP25.48■■□□□ 1.67
CACNB3-205ENST00000547392 CFAP45Q9UL16 551 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 H3BQV1 296 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 IFIT1P09914 478 aaKnown RBP25.48■■□□□ 1.67
CACNB3-205ENST00000547392 IFFO2Q5TF58 517 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 SPTLC3Q9NUV7 552 aa25.48■■□□□ 1.67
CACNB3-205ENST00000547392 A0A1B0GUL7 405 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 HSPD1P10809 573 aaKnown RBP25.47■■□□□ 1.67
CACNB3-205ENST00000547392 FBXL16Q8N461 479 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 CHMP4CQ96CF2 233 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 PRDM11Q9NQV5 511 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 NOLC1Q14978 699 aaKnown RBP eCLIP25.47■■□□□ 1.67
CACNB3-205ENST00000547392 ZNF830Q96NB3 372 aaPredicted RBP25.47■■□□□ 1.67
CACNB3-205ENST00000547392 ZBTB3Q9H5J0 574 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 KIF3AQ9Y496 699 aa25.47■■□□□ 1.67
CACNB3-205ENST00000547392 MAST3O60307 1309 aa25.46■■□□□ 1.67
CACNB3-205ENST00000547392 UQCRHLA0A096LP55 91 aa25.46■■□□□ 1.67
CACNB3-205ENST00000547392 UQCRHP07919 91 aa25.46■■□□□ 1.67
CACNB3-205ENST00000547392 FGD1P98174 961 aa25.46■■□□□ 1.67
CACNB3-205ENST00000547392 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
CACNB3-205ENST00000547392 TTC12Q9H892 705 aaPredicted RBP25.46■■□□□ 1.67
CACNB3-205ENST00000547392 E7EWF7 191 aa25.45■■□□□ 1.67
CACNB3-205ENST00000547392 IL2RBP14784 551 aa25.45■■□□□ 1.67
CACNB3-205ENST00000547392 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.67
CACNB3-205ENST00000547392 CAMK4Q16566 473 aa25.45■■□□□ 1.67
CACNB3-205ENST00000547392 CTDNEP1O95476 244 aa25.45■■□□□ 1.66
CACNB3-205ENST00000547392 ATL3Q6DD88 541 aa25.45■■□□□ 1.66
CACNB3-205ENST00000547392 ZNF274Q96GC6 653 aaPredicted RBP25.45■■□□□ 1.66
CACNB3-205ENST00000547392 ZNF594Q96JF6 807 aaPredicted RBP25.45■■□□□ 1.66
CACNB3-205ENST00000547392 LRRC2Q9BYS8 371 aa25.45■■□□□ 1.66
CACNB3-205ENST00000547392 CCDC9Q9Y3X0 531 aaKnown RBP25.45■■□□□ 1.66
CACNB3-205ENST00000547392 DYNC1I1O14576 645 aa25.44■■□□□ 1.66
CACNB3-205ENST00000547392 ADD1P35611 737 aaKnown RBP25.44■■□□□ 1.66
CACNB3-205ENST00000547392 LRRFIP1Q32MZ4 808 aaKnown RBP25.44■■□□□ 1.66
CACNB3-205ENST00000547392 UBE2Q2Q8WVN8 375 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms