RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 SLC6A14Q9UN76 642 aa8.46□□□□□ -1.06
LGR5-204ENST00000547310 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
LGR5-204ENST00000547310 TYRO3Q06418 890 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
LGR5-204ENST00000547310 RAB44Q7Z6P3 723 aaPredicted RBP8.45□□□□□ -1.06
LGR5-204ENST00000547310 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 EFCC1Q9HA90 598 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 C11orf16Q9NQ32 467 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
LGR5-204ENST00000547310 NAA30Q147X3 362 aaPredicted RBP8.44□□□□□ -1.06
LGR5-204ENST00000547310 OGFOD2Q6N063 350 aa8.44□□□□□ -1.06
LGR5-204ENST00000547310 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
LGR5-204ENST00000547310 STIM2Q9P246 746 aa8.44□□□□□ -1.06
LGR5-204ENST00000547310 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
LGR5-204ENST00000547310 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
LGR5-204ENST00000547310 TGFB1P01137 390 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 NPR3P17342 541 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 INPP5BP32019 993 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 PSAPL1Q6NUJ1 521 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 POU5F2Q8N7G0 328 aa8.43□□□□□ -1.06
LGR5-204ENST00000547310 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
LGR5-204ENST00000547310 MICAL2O94851 1124 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 C8AP07357 584 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 SCNN1AP37088 669 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
LGR5-204ENST00000547310 DTX1Q86Y01 620 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 TMEM130Q8N3G9 435 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
LGR5-204ENST00000547310 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
LGR5-204ENST00000547310 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
LGR5-204ENST00000547310 ETFBKMTQ8IXQ9 262 aa8.41□□□□□ -1.06
LGR5-204ENST00000547310 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
LGR5-204ENST00000547310 OPLAHO14841 1288 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 WNT11O96014 354 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 IDH3AP50213 366 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 KCNA1Q09470 495 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 AKTIPQ9H8T0 292 aa8.4□□□□□ -1.06
LGR5-204ENST00000547310 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
LGR5-204ENST00000547310 PDIA4P13667 645 aaKnown RBP8.39□□□□□ -1.07
LGR5-204ENST00000547310 EPB42P16452 691 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 GRIK1P39086 918 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 ARSDP51689 593 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 FKBP4Q02790 459 aaKnown RBP eCLIP8.39□□□□□ -1.07
LGR5-204ENST00000547310 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 CCER1Q8TC90 406 aaPredicted RBP8.39□□□□□ -1.07
LGR5-204ENST00000547310 BHMTQ93088 406 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 RAXQ9Y2V3 346 aa8.39□□□□□ -1.07
LGR5-204ENST00000547310 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
LGR5-204ENST00000547310 GRIK5Q16478 980 aa8.38□□□□□ -1.07
LGR5-204ENST00000547310 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
LGR5-204ENST00000547310 DLL1O00548 723 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 ICMTO60725 284 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 FAM13AO94988 1023 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 EGFRP00533 1210 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 ZDHHC13Q8IUH4 622 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
LGR5-204ENST00000547310 ZBTB39O15060 712 aa8.36□□□□□ -1.07
LGR5-204ENST00000547310 ALKBH2Q6NS38 261 aa8.36□□□□□ -1.07
LGR5-204ENST00000547310 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
LGR5-204ENST00000547310 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
LGR5-204ENST00000547310 ZAP70P43403 619 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 SERPINB4P48594 390 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 TBC1D8BQ0IIM8 1120 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 ECM1Q16610 540 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
LGR5-204ENST00000547310 Q6ZS46 218 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 TTC9Q92623 222 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
LGR5-204ENST00000547310 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
LGR5-204ENST00000547310 DEAF1O75398 565 aaPredicted RBP8.34□□□□□ -1.07
LGR5-204ENST00000547310 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
LGR5-204ENST00000547310 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
LGR5-204ENST00000547310 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
LGR5-204ENST00000547310 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
LGR5-204ENST00000547310 ABL1P00519 1130 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 MPSTP25325 297 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
LGR5-204ENST00000547310 MTMR3Q13615 1198 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 CCINQ13939 588 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 WFDC8Q8IUA0 241 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 KCNMB2Q9Y691 235 aa8.33□□□□□ -1.08
LGR5-204ENST00000547310 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
LGR5-204ENST00000547310 RPLP1P05386 114 aaKnown RBP8.32□□□□□ -1.08
LGR5-204ENST00000547310 PCSK7Q16549 785 aa8.32□□□□□ -1.08
LGR5-204ENST00000547310 ALX3O95076 343 aa8.31□□□□□ -1.08
LGR5-204ENST00000547310 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
LGR5-204ENST00000547310 MZF1P28698 734 aaPredicted RBP8.31□□□□□ -1.08
LGR5-204ENST00000547310 ZNF211Q13398 564 aaPredicted RBP8.31□□□□□ -1.08
LGR5-204ENST00000547310 LCE5AQ5TCM9 118 aa8.31□□□□□ -1.08
LGR5-204ENST00000547310 RGL4Q8IZJ4 473 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms