RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SAP130Q9H0E3 1048 aa9.22□□□□□ -0.93
CCDC38-204ENST00000546816 RFX1P22670 979 aa9.21□□□□□ -0.94
CCDC38-204ENST00000546816 FAM26DQ5JW98 314 aa9.21□□□□□ -0.94
CCDC38-204ENST00000546816 MAP4K3Q8IVH8 894 aa9.21□□□□□ -0.94
CCDC38-204ENST00000546816 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
CCDC38-204ENST00000546816 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
CCDC38-204ENST00000546816 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
CCDC38-204ENST00000546816 NLRP13Q86W25 1043 aa9.2□□□□□ -0.94
CCDC38-204ENST00000546816 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
CCDC38-204ENST00000546816 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
CCDC38-204ENST00000546816 PRMT3O60678 531 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 FSTP19883 344 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
CCDC38-204ENST00000546816 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 CACTIN-AS1Q8N1I8 211 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 RBSNQ9H1K0 784 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
CCDC38-204ENST00000546816 ZMIZ1Q9ULJ6 1067 aa9.19□□□□□ -0.94
CCDC38-204ENST00000546816 TNFRSF10BO14763 440 aa9.18□□□□□ -0.94
CCDC38-204ENST00000546816 ELOAQ14241 798 aaKnown RBP9.18□□□□□ -0.94
CCDC38-204ENST00000546816 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
CCDC38-204ENST00000546816 DCAF11Q8TEB1 546 aa9.17□□□□□ -0.94
CCDC38-204ENST00000546816 COL13A1Q5TAT6 717 aaPredicted RBP9.16□□□□□ -0.94
CCDC38-204ENST00000546816 MUC3BQ9H195 1237 aa9.16□□□□□ -0.94
CCDC38-204ENST00000546816 PPME1Q9Y570 386 aa9.16□□□□□ -0.94
CCDC38-204ENST00000546816 CAPN12Q6ZSI9 719 aa9.15□□□□□ -0.94
CCDC38-204ENST00000546816 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
CCDC38-204ENST00000546816 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.94
CCDC38-204ENST00000546816 GALNT11Q8NCW6 608 aa9.15□□□□□ -0.94
CCDC38-204ENST00000546816 STK32AQ8WU08 396 aa9.15□□□□□ -0.94
CCDC38-204ENST00000546816 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
CCDC38-204ENST00000546816 TM4SF5O14894 197 aa9.14□□□□□ -0.95
CCDC38-204ENST00000546816 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
CCDC38-204ENST00000546816 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
CCDC38-204ENST00000546816 ATP11AP98196 1134 aa9.13□□□□□ -0.95
CCDC38-204ENST00000546816 HYAL2Q12891 473 aa9.13□□□□□ -0.95
CCDC38-204ENST00000546816 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-204ENST00000546816 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
CCDC38-204ENST00000546816 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-204ENST00000546816 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 KIF4AO95239 1232 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 GLB1P16278 677 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 LCE3BQ5TA77 95 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
CCDC38-204ENST00000546816 WISP1O95388 367 aa9.11□□□□□ -0.95
CCDC38-204ENST00000546816 CD97P48960 835 aa9.11□□□□□ -0.95
CCDC38-204ENST00000546816 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
CCDC38-204ENST00000546816 SSTR4P31391 388 aa9.1□□□□□ -0.95
CCDC38-204ENST00000546816 ZAP70P43403 619 aa9.1□□□□□ -0.95
CCDC38-204ENST00000546816 CEP135Q66GS9 1140 aa9.1□□□□□ -0.95
CCDC38-204ENST00000546816 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
CCDC38-204ENST00000546816 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
CCDC38-204ENST00000546816 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
CCDC38-204ENST00000546816 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 CDC27P30260 824 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 CD68P34810 354 aaPredicted RBP9.09□□□□□ -0.95
CCDC38-204ENST00000546816 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
CCDC38-204ENST00000546816 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 SPACA7Q96KW9 195 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 LACRTQ9GZZ8 138 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
CCDC38-204ENST00000546816 FNDC3AQ9Y2H6 1198 aaKnown RBP9.09□□□□□ -0.95
CCDC38-204ENST00000546816 ZBTB39O15060 712 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 GSC2O15499 205 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC38-204ENST00000546816 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
CCDC38-204ENST00000546816 MCTP1Q6DN14 999 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 STIM2Q9P246 746 aa9.08□□□□□ -0.96
CCDC38-204ENST00000546816 ATG7O95352 703 aa9.07□□□□□ -0.96
CCDC38-204ENST00000546816 MED26O95402 600 aa9.07□□□□□ -0.96
CCDC38-204ENST00000546816 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
CCDC38-204ENST00000546816 CEP120Q8N960 986 aa9.07□□□□□ -0.96
CCDC38-204ENST00000546816 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
CCDC38-204ENST00000546816 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
CCDC38-204ENST00000546816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 FSCN2O14926 492 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 SCNN1AP37088 669 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
CCDC38-204ENST00000546816 CARD10Q9BWT7 1032 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 PBX4Q9BYU1 374 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 CEP41Q9BYV8 373 aa9.06□□□□□ -0.96
CCDC38-204ENST00000546816 COL17A1Q9UMD9 1497 aaPredicted RBP9.05□□□□□ -0.96
CCDC38-204ENST00000546816 UVSSAQ2YD98 709 aa9.05□□□□□ -0.96
CCDC38-204ENST00000546816 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
CCDC38-204ENST00000546816 ADAM11O75078 769 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 TGFB1P01137 390 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 EPHA1P21709 976 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms