RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
RAB5B-203ENST00000546810 PKN2Q16513 984 aaKnown RBP17.14■□□□□ 0.33
RAB5B-203ENST00000546810 SP8Q8IXZ3 490 aa17.14■□□□□ 0.33
RAB5B-203ENST00000546810 DPF2Q92785 391 aa17.14■□□□□ 0.33
RAB5B-203ENST00000546810 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
RAB5B-203ENST00000546810 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
RAB5B-203ENST00000546810 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
RAB5B-203ENST00000546810 NUP98P52948 1817 aa17.13■□□□□ 0.33
RAB5B-203ENST00000546810 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
RAB5B-203ENST00000546810 BBOX1O75936 387 aa17.13■□□□□ 0.33
RAB5B-203ENST00000546810 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
RAB5B-203ENST00000546810 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
RAB5B-203ENST00000546810 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
RAB5B-203ENST00000546810 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
RAB5B-203ENST00000546810 VAMP4O75379 141 aa17.12■□□□□ 0.33
RAB5B-203ENST00000546810 PDIA6Q15084 440 aa17.12■□□□□ 0.33
RAB5B-203ENST00000546810 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
RAB5B-203ENST00000546810 GIGYF2Q6Y7W6 1299 aaKnown RBP17.12■□□□□ 0.33
RAB5B-203ENST00000546810 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
RAB5B-203ENST00000546810 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
RAB5B-203ENST00000546810 EGFRP00533 1210 aa17.11■□□□□ 0.33
RAB5B-203ENST00000546810 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
RAB5B-203ENST00000546810 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
RAB5B-203ENST00000546810 PSMD14O00487 310 aa17.1■□□□□ 0.33
RAB5B-203ENST00000546810 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
RAB5B-203ENST00000546810 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
RAB5B-203ENST00000546810 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
RAB5B-203ENST00000546810 ZNF428Q96B54 188 aa17.1■□□□□ 0.33
RAB5B-203ENST00000546810 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
RAB5B-203ENST00000546810 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
RAB5B-203ENST00000546810 ANXA1P04083 346 aa17.09■□□□□ 0.33
RAB5B-203ENST00000546810 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
RAB5B-203ENST00000546810 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
RAB5B-203ENST00000546810 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
RAB5B-203ENST00000546810 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
RAB5B-203ENST00000546810 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.32
RAB5B-203ENST00000546810 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
RAB5B-203ENST00000546810 SULF1Q8IWU6 871 aa17.08■□□□□ 0.32
RAB5B-203ENST00000546810 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
RAB5B-203ENST00000546810 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.32
RAB5B-203ENST00000546810 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
RAB5B-203ENST00000546810 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
RAB5B-203ENST00000546810 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
RAB5B-203ENST00000546810 GRAPQ13588 217 aa17.07■□□□□ 0.32
RAB5B-203ENST00000546810 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
RAB5B-203ENST00000546810 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
RAB5B-203ENST00000546810 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
RAB5B-203ENST00000546810 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
RAB5B-203ENST00000546810 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
RAB5B-203ENST00000546810 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
RAB5B-203ENST00000546810 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
RAB5B-203ENST00000546810 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
RAB5B-203ENST00000546810 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
RAB5B-203ENST00000546810 FBXO46Q6PJ61 603 aaPredicted RBP17.05■□□□□ 0.32
RAB5B-203ENST00000546810 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
RAB5B-203ENST00000546810 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
RAB5B-203ENST00000546810 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
RAB5B-203ENST00000546810 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
RAB5B-203ENST00000546810 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
RAB5B-203ENST00000546810 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
RAB5B-203ENST00000546810 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
RAB5B-203ENST00000546810 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
RAB5B-203ENST00000546810 FKBP1BP68106 108 aa17.03■□□□□ 0.32
RAB5B-203ENST00000546810 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
RAB5B-203ENST00000546810 RTL9Q8NET4 1388 aa17.02■□□□□ 0.32
RAB5B-203ENST00000546810 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
RAB5B-203ENST00000546810 GPR25O00155 361 aa17.02■□□□□ 0.32
RAB5B-203ENST00000546810 ECE2O60344 883 aa17.02■□□□□ 0.32
RAB5B-203ENST00000546810 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.32
RAB5B-203ENST00000546810 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
RAB5B-203ENST00000546810 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.31
RAB5B-203ENST00000546810 FLIIQ13045 1269 aa17.01■□□□□ 0.31
RAB5B-203ENST00000546810 DOK7Q18PE1 504 aa17.01■□□□□ 0.31
RAB5B-203ENST00000546810 NOM1Q5C9Z4 860 aaKnown RBP17.01■□□□□ 0.31
RAB5B-203ENST00000546810 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
RAB5B-203ENST00000546810 C6orf229H3BNL8 230 aa17■□□□□ 0.31
RAB5B-203ENST00000546810 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
RAB5B-203ENST00000546810 ANGEL2Q5VTE6 544 aaKnown RBP17■□□□□ 0.31
RAB5B-203ENST00000546810 NLRP10Q86W26 655 aa17■□□□□ 0.31
RAB5B-203ENST00000546810 POLLQ9UGP5 575 aa17■□□□□ 0.31
RAB5B-203ENST00000546810 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
RAB5B-203ENST00000546810 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
RAB5B-203ENST00000546810 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 KSR2Q6VAB6 950 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 G2E3Q7L622 706 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 EYA3Q99504 573 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 LAMB2P55268 1798 aa16.99■□□□□ 0.31
RAB5B-203ENST00000546810 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 VIL1P09327 827 aaKnown RBP16.98■□□□□ 0.31
RAB5B-203ENST00000546810 TM4SF4P48230 202 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB5B-203ENST00000546810 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 SCARF1Q14162 830 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 MOB2Q70IA6 237 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
RAB5B-203ENST00000546810 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
RAB5B-203ENST00000546810 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
RAB5B-203ENST00000546810 FKTNO75072 461 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms