RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 LPIN3Q9BQK8 851 aa10.88□□□□□ -0.67
CPNE8-204ENST00000546603 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
CPNE8-204ENST00000546603 BRD1O95696 1058 aa10.87□□□□□ -0.67
CPNE8-204ENST00000546603 PRRT3Q5FWE3 981 aa10.87□□□□□ -0.67
CPNE8-204ENST00000546603 GLYCTKQ8IVS8 523 aa10.87□□□□□ -0.67
CPNE8-204ENST00000546603 GGNBP2Q9H3C7 697 aa10.87□□□□□ -0.67
CPNE8-204ENST00000546603 J3QW42 95 aa10.86□□□□□ -0.67
CPNE8-204ENST00000546603 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
CPNE8-204ENST00000546603 HYAL2Q12891 473 aa10.86□□□□□ -0.67
CPNE8-204ENST00000546603 TRIM28Q13263 835 aaKnown RBP10.86□□□□□ -0.67
CPNE8-204ENST00000546603 TRAPPC3LQ5T215 181 aa10.86□□□□□ -0.67
CPNE8-204ENST00000546603 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
CPNE8-204ENST00000546603 KRBA1A5PL33 1030 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 H3BRB1 525 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 FZD6O60353 706 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 EHHADHQ08426 723 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 SPACA7Q96KW9 195 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 TUT1Q9H6E5 874 aaKnown RBP10.85□□□□□ -0.67
CPNE8-204ENST00000546603 TMEM63CQ9P1W3 806 aa10.85□□□□□ -0.67
CPNE8-204ENST00000546603 IGHA1P01876 353 aa10.84□□□□□ -0.67
CPNE8-204ENST00000546603 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
CPNE8-204ENST00000546603 PLD4Q96BZ4 506 aa10.84□□□□□ -0.67
CPNE8-204ENST00000546603 GRIK5Q16478 980 aa10.82□□□□□ -0.68
CPNE8-204ENST00000546603 MSL1Q68DK7 614 aa10.82□□□□□ -0.68
CPNE8-204ENST00000546603 GPAT2Q6NUI2 795 aa10.82□□□□□ -0.68
CPNE8-204ENST00000546603 PMEPA1Q969W9 287 aa10.82□□□□□ -0.68
CPNE8-204ENST00000546603 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
CPNE8-204ENST00000546603 A6NHS1 94 aa10.81□□□□□ -0.68
CPNE8-204ENST00000546603 KIF4AO95239 1232 aa10.81□□□□□ -0.68
CPNE8-204ENST00000546603 RAC1P63000 192 aa10.81□□□□□ -0.68
CPNE8-204ENST00000546603 CNTN3Q9P232 1028 aa10.81□□□□□ -0.68
CPNE8-204ENST00000546603 BRPF3Q9ULD4 1205 aa10.81□□□□□ -0.68
CPNE8-204ENST00000546603 GNEQ9Y223 722 aaKnown RBP10.81□□□□□ -0.68
CPNE8-204ENST00000546603 CYP2E1P05181 493 aaPredicted RBP10.8□□□□□ -0.68
CPNE8-204ENST00000546603 CES1P23141 567 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 ECM1Q16610 540 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 COL13A1Q5TAT6 717 aaPredicted RBP10.8□□□□□ -0.68
CPNE8-204ENST00000546603 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 WFDC8Q8IUA0 241 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
CPNE8-204ENST00000546603 GJD3Q8N144 294 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 CACTIN-AS1Q8N1I8 211 aa10.8□□□□□ -0.68
CPNE8-204ENST00000546603 A0A0A0MRY4 1105 aa10.79□□□□□ -0.68
CPNE8-204ENST00000546603 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
CPNE8-204ENST00000546603 C1orf127Q8N9H9 656 aa10.79□□□□□ -0.68
CPNE8-204ENST00000546603 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 MSTNO14793 375 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 APBA3O96018 575 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 ITGB2P05107 769 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 DTWD1Q8N5C7 304 aa10.78□□□□□ -0.68
CPNE8-204ENST00000546603 C1QTNF9BB2RNN3 333 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 NDUFB5O43674 189 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 TNFRSF21O75509 655 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPNE8-204ENST00000546603 ELNP15502 786 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 GDF6Q6KF10 455 aaPredicted RBP10.77□□□□□ -0.69
CPNE8-204ENST00000546603 CD163Q86VB7 1156 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 CEP120Q8N960 986 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 SNX29Q8TEQ0 813 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
CPNE8-204ENST00000546603 PHACTR2O75167 634 aa10.76□□□□□ -0.69
CPNE8-204ENST00000546603 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
CPNE8-204ENST00000546603 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
CPNE8-204ENST00000546603 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
CPNE8-204ENST00000546603 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
CPNE8-204ENST00000546603 SOWAHDA6NJG2 315 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 CEP135Q66GS9 1140 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 FMR1NBQ8N0W7 255 aaPredicted RBP10.75□□□□□ -0.69
CPNE8-204ENST00000546603 IL22RA1Q8N6P7 574 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 SPOCK3Q9BQ16 436 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 PBX4Q9BYU1 374 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 CHRDQ9H2X0 955 aa10.75□□□□□ -0.69
CPNE8-204ENST00000546603 ATP11AP98196 1134 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 GRIK4Q16099 956 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 MUC3BQ9H195 1237 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 RASSF4Q9H2L5 321 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 TRIM33Q9UPN9 1127 aa10.74□□□□□ -0.69
CPNE8-204ENST00000546603 CHRNA4P43681 627 aa10.73□□□□□ -0.69
CPNE8-204ENST00000546603 BAG6P46379 1132 aa10.73□□□□□ -0.69
CPNE8-204ENST00000546603 KCNA1Q09470 495 aa10.73□□□□□ -0.69
CPNE8-204ENST00000546603 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
CPNE8-204ENST00000546603 FOXD3Q9UJU5 478 aaPredicted RBP10.73□□□□□ -0.69
CPNE8-204ENST00000546603 C9orf172C9J069 976 aa10.72□□□□□ -0.69
CPNE8-204ENST00000546603 NEFLP07196 543 aa10.72□□□□□ -0.69
CPNE8-204ENST00000546603 EREGO14944 169 aa10.71□□□□□ -0.69
CPNE8-204ENST00000546603 PROCP04070 461 aa10.71□□□□□ -0.69
CPNE8-204ENST00000546603 EDN3P14138 238 aa10.71□□□□□ -0.69
CPNE8-204ENST00000546603 SRA1Q9HD15 236 aaKnown RBP10.71□□□□□ -0.69
CPNE8-204ENST00000546603 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
CPNE8-204ENST00000546603 DCAF11Q8TEB1 546 aa10.7□□□□□ -0.7
CPNE8-204ENST00000546603 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
CPNE8-204ENST00000546603 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
CPNE8-204ENST00000546603 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
CPNE8-204ENST00000546603 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
CPNE8-204ENST00000546603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.7□□□□□ -0.7
CPNE8-204ENST00000546603 FAM177BA6PVY3 158 aa10.69□□□□□ -0.7
CPNE8-204ENST00000546603 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
CPNE8-204ENST00000546603 PTPRAP18433 802 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms