RNA–Protein interactions for RNA: ENST00000545921.5

SOX5-215, Transcript of SRY-box 5, human

APPRIS ALT1 TSL 2 BASIC

Gene SOX5, Length 2,589 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX5-215	ENST00000545921	COL15A1	P39059	1388 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	GIGYF1	O75420	1035 aa	Predicted RBP	11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	TERF2	Q15554	542 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	NBPF6	Q5VWK0	638 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	ERO1A	Q96HE7	468 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	NBPF4	Q96M43	638 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	SEC62	Q99442	399 aa	Known RBP	11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	SNRK	Q9NRH2	765 aa		11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	CCDC9	Q9Y3X0	531 aa	Known RBP	11.66	□□□□□ -0.54
SOX5-215	ENST00000545921	SLU7	O95391	586 aa	Known RBP	11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	ME1	P48163	572 aa		11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	KRT32	Q14532	448 aa		11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	USP28	Q96RU2	1077 aa		11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	DNAJC2	Q99543	621 aa	Known RBP	11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	UBR1	Q8IWV7	1749 aa		11.65	□□□□□ -0.54
SOX5-215	ENST00000545921	CCT2	P78371	535 aa	Known RBP	11.65	□□□□□ -0.55
SOX5-215	ENST00000545921	CEP57L1	Q8IYX8	460 aa		11.65	□□□□□ -0.55
SOX5-215	ENST00000545921	FSIP1	Q8NA03	581 aa		11.65	□□□□□ -0.55
SOX5-215	ENST00000545921	ANO10	Q9NW15	660 aa		11.65	□□□□□ -0.55
SOX5-215	ENST00000545921	ERBB3	P21860	1342 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	KDM3B	Q7LBC6	1761 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	DIP2A	Q14689	1571 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	ZBTB22	O15209	634 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	CTAGE5	O15320	804 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	CYP21A2	P08686	494 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	SNW1	Q13573	536 aa	Known RBP	11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	LRRC59	Q96AG4	307 aa	Known RBP	11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	CHMP4A	Q9BY43	222 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	HDAC5	Q9UQL6	1122 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	SMC2	O95347	1197 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	ADD1	P35611	737 aa	Known RBP	11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	TAF3	Q5VWG9	929 aa		11.64	□□□□□ -0.55
SOX5-215	ENST00000545921	PLEKHG1	Q9ULL1	1385 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	PTPDC1	A2A3K4	754 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	APOBR	Q0VD83	1088 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	TSGA10IP	Q3SY00	556 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	LRRN4CL	Q8ND94	238 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	LINS1	Q8NG48	757 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	NCOA5	Q9HCD5	579 aa	Known RBP	11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	MED1	Q15648	1581 aa	Predicted RBP	11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	FAM160A1	Q05DH4	1040 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	ERCC6L	Q2NKX8	1250 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	SYT10	Q6XYQ8	523 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	NSUN7	Q8NE18	718 aa	Known RBP	11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	FMNL2	Q96PY5	1086 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	JCAD	Q9P266	1359 aa		11.63	□□□□□ -0.55
SOX5-215	ENST00000545921	GORAB	Q5T7V8	394 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	USPL1	Q5W0Q7	1092 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	DDX46	Q7L014	1031 aa	Known RBP	11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	TMC6	Q7Z403	805 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	NBPF11	Q86T75	865 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	SDF4	Q9BRK5	362 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	ZNF446	Q9NWS9	450 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	RCOR1	Q9UKL0	485 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	ZNF609	O15014	1411 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921		A0A1B0GVL5	298 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	ZRSR1	Q15695	479 aa	Known RBP	11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	STOX1	Q6ZVD7	989 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	RIC3	Q7Z5B4	369 aa		11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	NAT10	Q9H0A0	1025 aa	Known RBP	11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	DBNL	Q9UJU6	430 aa	Known RBP	11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	MARF1	Q9Y4F3	1742 aa	Known RBP	11.62	□□□□□ -0.55
SOX5-215	ENST00000545921	BIN1	O00499	593 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	CTDNEP1	O95476	244 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	GSDMD	P57764	484 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	DPCR1	Q3MIW9	517 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	SLFNL1	Q499Z3	407 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	AKAP4	Q5JQC9	854 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	EPHA10	Q5JZY3	1008 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	E4F1	Q66K89	784 aa	Predicted RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	CHST3	Q7LGC8	479 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	SMARCC2	Q8TAQ2	1214 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	PPP1R13B	Q96KQ4	1090 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921		U3KPZ7	1027 aa	Predicted RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	MYH15	Q9Y2K3	1946 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	CCDC66	A2RUB6	948 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	DDX58	O95786	925 aa	Known RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	MYL6B	P14649	208 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	C1orf141	Q5JVX7	400 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	NAA16	Q6N069	864 aa	Predicted RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	ENGASE	Q8NFI3	743 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	BBX	Q8WY36	941 aa	Predicted RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	ZNF396	Q96N95	335 aa	Predicted RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	XPO4	Q9C0E2	1151 aa	Known RBP	11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	IFNK	Q9P0W0	207 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	LTN1	O94822	1766 aa		11.61	□□□□□ -0.55
SOX5-215	ENST00000545921	PFKFB2	O60825	505 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	IGKV5-2	P06315	115 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	TFCP2	Q12800	502 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	EID1	Q9Y6B2	187 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	KIF2A	O00139	706 aa	Predicted RBP	11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	RNMT	O43148	476 aa	Known RBP	11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	SFPQ	P23246	707 aa	Known RBP eCLIP	11.6	□□□□□ -0.55	2e-6	■■□□□ 11.9
SOX5-215	ENST00000545921	MCMDC2	Q4G0Z9	681 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	ARMCX5	Q6P1M9	558 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	HOMER1	Q86YM7	354 aa		11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	MRPS27	Q92552	414 aa	Known RBP	11.6	□□□□□ -0.55
SOX5-215	ENST00000545921	PCDHA7	Q9UN72	937 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms