RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-225ENST00000545920 CNTROBQ8N137 903 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 PRKD2Q9BZL6 878 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 TMEM63CQ9P1W3 806 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 TBX22Q9Y458 520 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 CACNA1FO60840 1977 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 OVOS2A0A0G2JMS6 1433 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 CCDC171Q6TFL3 1326 aa7.76□□□□□ -1.17
SNHG1-225ENST00000545920 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 HOXA2O43364 376 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 ABL2P42684 1182 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 MTX1Q13505 466 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 IRF5Q13568 498 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 DCTN1Q14203 1278 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 MCM10Q7L590 875 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 ZGPATQ8N5A5 531 aaKnown RBP7.75□□□□□ -1.17
SNHG1-225ENST00000545920 CABLES1Q8TDN4 633 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 OTUD7AQ8TE49 926 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-225ENST00000545920 KCNB2Q92953 911 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 GLMNQ92990 594 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 GPATCH3Q96I76 525 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
SNHG1-225ENST00000545920 ZBTB3Q9H5J0 574 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 USP25Q9UHP3 1055 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 RIMS1Q86UR5 1692 aaKnown RBP7.75□□□□□ -1.17
SNHG1-225ENST00000545920 MAP3K19Q56UN5 1328 aa7.75□□□□□ -1.17
SNHG1-225ENST00000545920 PLEKHG2Q9H7P9 1386 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 SLIT1O75093 1534 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 GOLGA6L6A8MZA4 724 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 SGSM2O43147 1006 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 SMARCA5O60264 1052 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 GLRX3O76003 335 aaKnown RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 CAVIN2O95810 425 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 ZSCAN22P10073 491 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 PDCP20941 246 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 FKBP5Q13451 457 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 MTHFSDQ2M296 383 aaKnown RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 ALDH8A1Q9H2A2 487 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 ANO2Q9NQ90 1003 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 LIMCH1Q9UPQ0 1083 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 EID1Q9Y6B2 187 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 V9GY48 417 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-225ENST00000545920 ARHGAP23Q9P227 1491 aa7.74□□□□□ -1.17
SNHG1-225ENST00000545920 RPAP1Q9BWH6 1393 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-225ENST00000545920 NCAPD2Q15021 1401 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 SYCE3A1L190 88 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 NUTM2BA6NNL0 878 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-225ENST00000545920 NUTM2EB1AL46 878 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-225ENST00000545920 GPR37L1O60883 481 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 ALDH1L1O75891 902 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 FDX1P10109 184 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 FBLN1P23142 703 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 GTF2F1P35269 517 aaKnown RBP eCLIP7.73□□□□□ -1.17
SNHG1-225ENST00000545920 AMPHP49418 695 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 ANKRD1Q15327 319 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 HSP90AB2PQ58FF8 381 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 VPS53Q5VIR6 699 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 SLC4A10Q6U841 1118 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 NUTM2AQ8IVF1 878 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-225ENST00000545920 RDH13Q8NBN7 331 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 CHMP4CQ96CF2 233 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 TTC14Q96N46 770 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 IL21Q9HBE4 155 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 NDUFB9Q9Y6M9 179 aa7.73□□□□□ -1.17
SNHG1-225ENST00000545920 CEMIPQ8WUJ3 1361 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 UBR1Q8IWV7 1749 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PEAK1Q9H792 1746 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PTMAP06454 111 aaKnown RBP7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PSMA5P28066 241 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PKP1Q13835 747 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 WASHC4Q2M389 1173 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 MYRIPQ8NFW9 859 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PIBF1Q8WXW3 757 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 USP44Q9H0E7 712 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 SPTLC3Q9NUV7 552 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 PCDHGC3Q9UN70 934 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 FAM208AQ9UK61 1670 aaKnown RBP7.72□□□□□ -1.17
SNHG1-225ENST00000545920 ELP1O95163 1332 aa7.72□□□□□ -1.17
SNHG1-225ENST00000545920 XRN1Q8IZH2 1706 aaKnown RBP7.72□□□□□ -1.17
SNHG1-225ENST00000545920 TUBGCP6Q96RT7 1819 aa7.71□□□□□ -1.17
SNHG1-225ENST00000545920 STX6O43752 255 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 SLC10A3P09131 477 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 PDE4CQ08493 712 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 USP48Q86UV5 1035 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 PI4K2BQ8TCG2 481 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 RILPL2Q969X0 211 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 MTRQ99707 1265 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 TRIM34Q9BYJ4 488 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.18
SNHG1-225ENST00000545920 DIAPH3Q9NSV4 1193 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 SMC3Q9UQE7 1217 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 EXOC6BQ9Y2D4 811 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 LRRFIP2Q9Y608 721 aaKnown RBP7.71□□□□□ -1.18
SNHG1-225ENST00000545920 FMN2Q9NZ56 1722 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms