RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ATP5J2-PTCD1G3V325 749 aa18.09■□□□□ 0.49
CNN3-207ENST00000545882 CYP27B1O15528 508 aa18.09■□□□□ 0.49
CNN3-207ENST00000545882 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
CNN3-207ENST00000545882 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
CNN3-207ENST00000545882 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
CNN3-207ENST00000545882 BRF1Q92994 677 aa18.09■□□□□ 0.49
CNN3-207ENST00000545882 DNAJC2Q99543 621 aaKnown RBP18.09■□□□□ 0.49
CNN3-207ENST00000545882 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
CNN3-207ENST00000545882 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 LUZP1Q86V48 1076 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 SPC24Q8NBT2 197 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 TNMDQ9H2S6 317 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 CLSTN2Q9H4D0 955 aa18.08■□□□□ 0.49
CNN3-207ENST00000545882 A0A087WZG4 1122 aa18.08■□□□□ 0.48
CNN3-207ENST00000545882 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.48
CNN3-207ENST00000545882 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
CNN3-207ENST00000545882 CBX8Q9HC52 389 aa18.08■□□□□ 0.48
CNN3-207ENST00000545882 DDX19AQ9NUU7 478 aaKnown RBP18.08■□□□□ 0.48
CNN3-207ENST00000545882 NR1I2O75469 434 aa18.07■□□□□ 0.48
CNN3-207ENST00000545882 HMGN5P82970 282 aaKnown RBP18.07■□□□□ 0.48
CNN3-207ENST00000545882 ANO6Q4KMQ2 910 aa18.07■□□□□ 0.48
CNN3-207ENST00000545882 SMARCC2Q8TAQ2 1214 aa18.07■□□□□ 0.48
CNN3-207ENST00000545882 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
CNN3-207ENST00000545882 FOXO4P98177 505 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 SCRN1Q12765 414 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 DDX11Q96FC9 970 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 DCAF5Q96JK2 942 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 FMNL2Q96PY5 1086 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 TPM3P06753 285 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 SLFNL1Q499Z3 407 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 TTC5Q8N0Z6 440 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 KBTBD3Q8NAB2 608 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 TSC1Q92574 1164 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
CNN3-207ENST00000545882 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
CNN3-207ENST00000545882 ADD1P35611 737 aaKnown RBP18.05■□□□□ 0.48
CNN3-207ENST00000545882 LMBR1LQ6UX01 489 aa18.05■□□□□ 0.48
CNN3-207ENST00000545882 ATG9AQ7Z3C6 839 aa18.05■□□□□ 0.48
CNN3-207ENST00000545882 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
CNN3-207ENST00000545882 GOLGA6L4A6NEF3 574 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 H7C1W4 665 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 PFKFB2O60825 505 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 A0A0G2JLW4 131 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 CTDNEP1O95476 244 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
CNN3-207ENST00000545882 PTGS1P23219 599 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 NBPF14Q5TI25 921 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
CNN3-207ENST00000545882 ZNF710Q8N1W2 664 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
CNN3-207ENST00000545882 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
CNN3-207ENST00000545882 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
CNN3-207ENST00000545882 NSUN7Q8NE18 718 aaKnown RBP18.03■□□□□ 0.48
CNN3-207ENST00000545882 EXOSC10Q01780 885 aaKnown RBP18.02■□□□□ 0.48
CNN3-207ENST00000545882 MTERF4Q7Z6M4 381 aaKnown RBP18.02■□□□□ 0.48
CNN3-207ENST00000545882 PLA2G4DQ86XP0 818 aa18.02■□□□□ 0.48
CNN3-207ENST00000545882 ZSCAN16Q9H4T2 348 aaPredicted RBP18.02■□□□□ 0.48
CNN3-207ENST00000545882 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
CNN3-207ENST00000545882 GOLGA6L6A8MZA4 724 aa18.02■□□□□ 0.47
CNN3-207ENST00000545882 DHX32Q7L7V1 743 aaKnown RBP18.02■□□□□ 0.47
CNN3-207ENST00000545882 BICD2Q8TD16 824 aa18.02■□□□□ 0.47
CNN3-207ENST00000545882 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.47
CNN3-207ENST00000545882 AGXT2Q9BYV1 514 aa18.02■□□□□ 0.47
CNN3-207ENST00000545882 NWD2Q9ULI1 1742 aa18.02■□□□□ 0.47
CNN3-207ENST00000545882 H3BQV1 296 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 GOLIM4O00461 696 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 ZNF75DP51815 510 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 HELLSQ9NRZ9 838 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
CNN3-207ENST00000545882 SPEF2Q9C093 1822 aa18■□□□□ 0.47
CNN3-207ENST00000545882 CABP4P57796 275 aa18■□□□□ 0.47
CNN3-207ENST00000545882 APOBRQ0VD83 1088 aa18■□□□□ 0.47
CNN3-207ENST00000545882 ZMYM1Q5SVZ6 1142 aa18■□□□□ 0.47
CNN3-207ENST00000545882 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
CNN3-207ENST00000545882 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
CNN3-207ENST00000545882 NRBP1Q9UHY1 535 aa18■□□□□ 0.47
CNN3-207ENST00000545882 ABCA3Q99758 1704 aa18■□□□□ 0.47
CNN3-207ENST00000545882 TIMM10P62072 90 aa18■□□□□ 0.47
CNN3-207ENST00000545882 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
CNN3-207ENST00000545882 CCDC186Q7Z3E2 898 aa18■□□□□ 0.47
CNN3-207ENST00000545882 NEUROD6Q96NK8 337 aa18■□□□□ 0.47
CNN3-207ENST00000545882 GPR108Q9NPR9 543 aa18■□□□□ 0.47
CNN3-207ENST00000545882 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
CNN3-207ENST00000545882 PAPPAQ13219 1627 aa17.99■□□□□ 0.47
CNN3-207ENST00000545882 HSPA2P54652 639 aa17.99■□□□□ 0.47
CNN3-207ENST00000545882 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
CNN3-207ENST00000545882 FTOQ9C0B1 505 aaKnown RBP eCLIP17.99■□□□□ 0.47
CNN3-207ENST00000545882 CFAP45Q9UL16 551 aa17.99■□□□□ 0.47
CNN3-207ENST00000545882 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
CNN3-207ENST00000545882 SALL1Q9NSC2 1324 aa17.99■□□□□ 0.47
CNN3-207ENST00000545882 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms