RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
TNC-213ENST00000544972 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
TNC-213ENST00000544972 PDE8BO95263 885 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 ADORA1P30542 326 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
TNC-213ENST00000544972 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 MSH5O43196 834 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 NLRP3Q96P20 1036 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 MPHOSPH8Q99549 860 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 HAUS7Q99871 368 aa13.83□□□□□ -0.2
TNC-213ENST00000544972 FGFR2P21802 821 aa13.82□□□□□ -0.2
TNC-213ENST00000544972 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
TNC-213ENST00000544972 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
TNC-213ENST00000544972 EDC3Q96F86 508 aaKnown RBP13.82□□□□□ -0.2
TNC-213ENST00000544972 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
TNC-213ENST00000544972 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
TNC-213ENST00000544972 REC8O95072 547 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
TNC-213ENST00000544972 DDR1Q08345 913 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
TNC-213ENST00000544972 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
TNC-213ENST00000544972 KIF2CQ99661 725 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
TNC-213ENST00000544972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.8□□□□□ -0.2
TNC-213ENST00000544972 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
TNC-213ENST00000544972 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
TNC-213ENST00000544972 SGSM2O43147 1006 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 TAF5LO75529 589 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
TNC-213ENST00000544972 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
TNC-213ENST00000544972 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
TNC-213ENST00000544972 SNAP23O00161 211 aa13.79□□□□□ -0.2
TNC-213ENST00000544972 CHRNDQ07001 517 aa13.79□□□□□ -0.2
TNC-213ENST00000544972 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
TNC-213ENST00000544972 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
TNC-213ENST00000544972 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
TNC-213ENST00000544972 LPIN2Q92539 896 aa13.79□□□□□ -0.2
TNC-213ENST00000544972 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
TNC-213ENST00000544972 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
TNC-213ENST00000544972 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 NPHP1O15259 732 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
TNC-213ENST00000544972 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 RPS8P62241 208 aaKnown RBP13.78□□□□□ -0.2
TNC-213ENST00000544972 SCARF1Q14162 830 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
TNC-213ENST00000544972 NRXN2Q9P2S2 1712 aa13.77□□□□□ -0.2
TNC-213ENST00000544972 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
TNC-213ENST00000544972 NLGN1Q8N2Q7 840 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.21
TNC-213ENST00000544972 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 MINPP1Q9UNW1 487 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
TNC-213ENST00000544972 HIP1O00291 1037 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 GOLIM4O00461 696 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
TNC-213ENST00000544972 SLC15A2Q16348 729 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 ANTXR1Q9H6X2 564 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 A0A0D9SFI3 127 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
TNC-213ENST00000544972 CHGBP05060 677 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 SLC5A1P13866 664 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 MCAMP43121 646 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 PHKA1P46020 1223 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 ST5P78524 1137 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 RUFY2Q8WXA3 655 aa13.76□□□□□ -0.21
TNC-213ENST00000544972 LSG1Q9H089 658 aaKnown RBP13.76□□□□□ -0.21
TNC-213ENST00000544972 QSER1Q2KHR3 1735 aa13.75□□□□□ -0.21
TNC-213ENST00000544972 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
TNC-213ENST00000544972 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
TNC-213ENST00000544972 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
TNC-213ENST00000544972 PI16Q6UXB8 463 aa13.75□□□□□ -0.21
TNC-213ENST00000544972 DEFB132Q7Z7B7 95 aa13.75□□□□□ -0.21
TNC-213ENST00000544972 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
TNC-213ENST00000544972 ZAP70P43403 619 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
TNC-213ENST00000544972 RAD50Q92878 1312 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 BAG6P46379 1132 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 GRAPQ13588 217 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
TNC-213ENST00000544972 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
TNC-213ENST00000544972 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms