RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
CIT-215ENST00000544800 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
CIT-215ENST00000544800 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
CIT-215ENST00000544800 ZNF530Q6P9A1 599 aaPredicted RBP9.63□□□□□ -0.87
CIT-215ENST00000544800 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
CIT-215ENST00000544800 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
CIT-215ENST00000544800 TMX4Q9H1E5 349 aaPredicted RBP9.63□□□□□ -0.87
CIT-215ENST00000544800 CLCN6P51797 869 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 CRHR2Q13324 411 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 TTLL12Q14166 644 aaPredicted RBP9.62□□□□□ -0.87
CIT-215ENST00000544800 MTFR1Q15390 333 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
CIT-215ENST00000544800 RAB3GAP2Q9H2M9 1393 aa9.62□□□□□ -0.87
CIT-215ENST00000544800 IGF2BP3O00425 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
CIT-215ENST00000544800 RPS12P25398 132 aaKnown RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 HOXA10P31260 410 aaPredicted RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 IL6STP40189 918 aaPredicted RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 MAGEA10P43363 369 aaPredicted RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 KIAA2012Q0VF49 1180 aa9.61□□□□□ -0.87
CIT-215ENST00000544800 AMOTQ4VCS5 1084 aa9.61□□□□□ -0.87
CIT-215ENST00000544800 RTFDC1Q9BY42 306 aaPredicted RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
CIT-215ENST00000544800 KDM3BQ7LBC6 1761 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 FYB1O15117 783 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 CAPN2P17655 700 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 KIF4BQ2VIQ3 1234 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 C1orf141Q5JVX7 400 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
CIT-215ENST00000544800 TCERG1O14776 1098 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 ANGEL2Q5VTE6 544 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 PPARGC1BQ86YN6 1023 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 ATXN2LQ8WWM7 1075 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 UHRF1Q96T88 793 aaPredicted RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 SEMA6BQ9H3T3 888 aa9.59□□□□□ -0.87
CIT-215ENST00000544800 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
CIT-215ENST00000544800 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
CIT-215ENST00000544800 ASTN2O75129 1339 aaPredicted RBP9.58□□□□□ -0.88
CIT-215ENST00000544800 KIF7Q2M1P5 1343 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 YDJCA8MPS7 323 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 PSMD14O00487 310 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 FOSL2P15408 326 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 NF2P35240 595 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 PRMT2P55345 433 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 SLC39A6Q13433 755 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
CIT-215ENST00000544800 MYLIPQ8WY64 445 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
CIT-215ENST00000544800 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 RNF208Q9H0X6 261 aa9.58□□□□□ -0.88
CIT-215ENST00000544800 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
CIT-215ENST00000544800 ECM2O94769 699 aaPredicted RBP9.57□□□□□ -0.88
CIT-215ENST00000544800 GNRH1P01148 92 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 ZBTB48P10074 688 aaPredicted RBP9.57□□□□□ -0.88
CIT-215ENST00000544800 CCL5P13501 91 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 SCARF1Q14162 830 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 ARMC9Q7Z3E5 817 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
CIT-215ENST00000544800 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
CIT-215ENST00000544800 SLC52A2Q9HAB3 445 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 ZNF652Q9Y2D9 606 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 CHD8Q9HCK8 2581 aa9.57□□□□□ -0.88
CIT-215ENST00000544800 SGPL1O95470 568 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 TMEM31Q5JXX7 168 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 LDLRAD1Q5T700 205 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 DPP8Q6V1X1 898 aaPredicted RBP9.56□□□□□ -0.88
CIT-215ENST00000544800 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 ASB2Q96Q27 587 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
CIT-215ENST00000544800 ATP6V0A2Q9Y487 856 aa9.56□□□□□ -0.88
CIT-215ENST00000544800 ZNF646O15015 1829 aaPredicted RBP9.55□□□□□ -0.88
CIT-215ENST00000544800 FAM177BA6PVY3 158 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 RGL2O15211 777 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 KIF22Q14807 665 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 ZNF496Q96IT1 587 aaPredicted RBP9.55□□□□□ -0.88
CIT-215ENST00000544800 TSPYL2Q9H2G4 693 aaPredicted RBP9.55□□□□□ -0.88
CIT-215ENST00000544800 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
CIT-215ENST00000544800 FAM205AQ6ZU69 1335 aa9.55□□□□□ -0.88
CIT-215ENST00000544800 SYN1P17600 705 aa9.54□□□□□ -0.88
CIT-215ENST00000544800 GRK4P32298 578 aa9.54□□□□□ -0.88
CIT-215ENST00000544800 PRAMEF18Q5VWM3 479 aa9.54□□□□□ -0.88
CIT-215ENST00000544800 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
CIT-215ENST00000544800 UBXN2AP68543 259 aa9.53□□□□□ -0.88
CIT-215ENST00000544800 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
CIT-215ENST00000544800 BAHCC1Q9P281 2608 aa9.52□□□□□ -0.88
CIT-215ENST00000544800 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
CIT-215ENST00000544800 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 NECAB2Q7Z6G3 386 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 USP38Q8NB14 1042 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms