RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 TMEM2Q9UHN6 1383 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 IFNKQ9P0W0 207 aa15.44■□□□□ 0.06
PCMTD1-208ENST00000544451 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 MAP4K1Q92918 833 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 USP28Q96RU2 1077 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 CLSTN2Q9H4D0 955 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 TSPOAP1O95153 1857 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 POLA2Q14181 598 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 NECTIN1Q15223 517 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 KCNF1Q9H3M0 494 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 GJB4Q9NTQ9 266 aa15.43■□□□□ 0.06
PCMTD1-208ENST00000544451 KLHL10Q6JEL2 608 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 ZNF496Q96IT1 587 aaPredicted RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 DDX21Q9NR30 783 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 HMG20BQ9P0W2 317 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 TNNI3KQ59H18 835 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 CPLX3Q8WVH0 158 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 FPGT-TNNI3KV9GXZ4 949 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 SYT10Q6XYQ8 523 aa15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 DBNLQ9UJU6 430 aaKnown RBP15.42■□□□□ 0.06
PCMTD1-208ENST00000544451 EVA1CP58658 441 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 IMMTQ16891 758 aaKnown RBP15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 NEO1Q92859 1461 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 CYP21A2P08686 494 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 ELF2Q15723 593 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 SPECC1Q5M775 1068 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 ZNF790Q6PG37 636 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 TOM1L2Q6ZVM7 507 aa15.41■□□□□ 0.06
PCMTD1-208ENST00000544451 GCKRQ14397 625 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 TAF5LO75529 589 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 SCRN1Q12765 414 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 ANKLE2Q86XL3 938 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 TM6SF1Q9BZW5 370 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 UBXN4Q92575 508 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 FRMPD1Q5SYB0 1578 aa15.4■□□□□ 0.06
PCMTD1-208ENST00000544451 DHX16O60231 1041 aaKnown RBP15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 SMAP1Q8IYB5 467 aaPredicted RBP15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 MRPS27Q92552 414 aaKnown RBP15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 GTF3C6Q969F1 213 aa15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 PGBD1Q96JS3 809 aa15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 ATF3P18847 181 aa15.39■□□□□ 0.05
PCMTD1-208ENST00000544451 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 ZNF213O14771 459 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 AKAP17AQ02040 695 aaKnown RBP15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 CCDC144BQ3MJ40 725 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 NEURL1BA8MQ27 555 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 GOLGA8FQ08AF8 430 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 GOLGA8DPQ0D2H9 430 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 SNRPA1P09661 255 aaKnown RBP15.38■□□□□ 0.05
PCMTD1-208ENST00000544451 MYL10Q9BUA6 226 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 SAFBQ15424 915 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 PAXBP1Q9Y5B6 917 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 CTAGE5O15320 804 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 PRC1O43663 620 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 A1BGP04217 495 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 ZNF710Q8N1W2 664 aa15.37■□□□□ 0.05
PCMTD1-208ENST00000544451 HMGB1P09429 215 aaKnown RBP15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 ARGLU1Q9NWB6 273 aaPredicted RBP15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 SPTLC2O15270 562 aa15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 IQSEC3Q9UPP2 1182 aaPredicted RBP15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 TBX22Q9Y458 520 aa15.36■□□□□ 0.05
PCMTD1-208ENST00000544451 TCHHQ07283 1943 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 PHKBQ93100 1093 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 UBASH3AP57075 661 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 FAM160A1Q05DH4 1040 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms