RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 GOLIM4O00461 696 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 TAF5LO75529 589 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 KCNQ4P56696 695 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 MCMDC2Q4G0Z9 681 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 TTC39AQ5SRH9 613 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
SPDEF-202ENST00000544425 RBM8AQ9Y5S9 174 aaKnown RBP19.3■□□□□ 0.68
SPDEF-202ENST00000544425 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
SPDEF-202ENST00000544425 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
SPDEF-202ENST00000544425 ADORA1P30542 326 aa19.29■□□□□ 0.68
SPDEF-202ENST00000544425 CUL4AQ13619 759 aa19.29■□□□□ 0.68
SPDEF-202ENST00000544425 RAB3GAP1Q15042 981 aa19.29■□□□□ 0.68
SPDEF-202ENST00000544425 TMX3Q96JJ7 454 aa19.29■□□□□ 0.68
SPDEF-202ENST00000544425 HELLSQ9NRZ9 838 aa19.29■□□□□ 0.68
SPDEF-202ENST00000544425 FAM177BA6PVY3 158 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 LRRFIP1Q32MZ4 808 aaKnown RBP19.28■□□□□ 0.68
SPDEF-202ENST00000544425 USPL1Q5W0Q7 1092 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
SPDEF-202ENST00000544425 ZNF589Q86UQ0 364 aaPredicted RBP19.28■□□□□ 0.68
SPDEF-202ENST00000544425 UPF3BQ9BZI7 483 aaKnown RBP19.28■□□□□ 0.68
SPDEF-202ENST00000544425 SSFA2P28290 1259 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 TSGA10IPQ3SY00 556 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 RNF20Q5VTR2 975 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 CREB3L3Q68CJ9 461 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 TTC14Q96N46 770 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
SPDEF-202ENST00000544425 RTCBQ9Y3I0 505 aaKnown RBP19.28■□□□□ 0.68
SPDEF-202ENST00000544425 SLC10A5Q5PT55 438 aa19.27■□□□□ 0.68
SPDEF-202ENST00000544425 INTS4Q96HW7 963 aaKnown RBP19.27■□□□□ 0.68
SPDEF-202ENST00000544425 ZSWIM6Q9HCJ5 1215 aa19.27■□□□□ 0.68
SPDEF-202ENST00000544425 BTAF1O14981 1849 aa19.27■□□□□ 0.68
SPDEF-202ENST00000544425 LRP5O75197 1615 aa19.27■□□□□ 0.67
SPDEF-202ENST00000544425 FGFR2P21802 821 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 KCNJ4P48050 445 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 SF3B3Q15393 1217 aaKnown RBP19.26■□□□□ 0.67
SPDEF-202ENST00000544425 ZMYM1Q5SVZ6 1142 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 LPIN2Q92539 896 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 MPHOSPH8Q99549 860 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 HMG20BQ9P0W2 317 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 SLC27A2O14975 620 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 GNPATO15228 680 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 NUCB2P80303 420 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 PUM3Q15397 648 aaKnown RBP19.26■□□□□ 0.67
SPDEF-202ENST00000544425 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
SPDEF-202ENST00000544425 RNF113AO15541 343 aaKnown RBP19.25■□□□□ 0.67
SPDEF-202ENST00000544425 ZPR1O75312 459 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 MCM4P33991 863 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 IGHMBP2P38935 993 aaKnown RBP19.25■□□□□ 0.67
SPDEF-202ENST00000544425 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 SEC31BQ9NQW1 1179 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 SPEF2Q9C093 1822 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 MYH3P11055 1940 aa19.25■□□□□ 0.67
SPDEF-202ENST00000544425 ZFYP08048 801 aaPredicted RBP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 PSMA5P28066 241 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 VPS53Q5VIR6 699 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 TBC1D9BQ66K14 1250 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 U3KPZ7 1027 aaPredicted RBP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 SEC62Q99442 399 aaKnown RBP19.24■□□□□ 0.67
SPDEF-202ENST00000544425 CYP46A1Q9Y6A2 500 aa19.24■□□□□ 0.67
SPDEF-202ENST00000544425 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
SPDEF-202ENST00000544425 ADCK5Q3MIX3 580 aa19.23■□□□□ 0.67
SPDEF-202ENST00000544425 CLEC17AQ6ZS10 378 aa19.23■□□□□ 0.67
SPDEF-202ENST00000544425 RUFY3Q7L099 469 aa19.23■□□□□ 0.67
SPDEF-202ENST00000544425 JAKMIP1Q96N16 626 aaKnown RBP19.23■□□□□ 0.67
SPDEF-202ENST00000544425 SETDB2Q96T68 719 aa19.23■□□□□ 0.67
SPDEF-202ENST00000544425 CDC5LQ99459 802 aaKnown RBP19.23■□□□□ 0.67
SPDEF-202ENST00000544425 UQCRFS1P1P0C7P4 283 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 SCARF1Q14162 830 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 DSCC1Q9BVC3 393 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 CHGBP05060 677 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 ARID4AP29374 1257 aaPredicted RBP19.22■□□□□ 0.67
SPDEF-202ENST00000544425 ZAP70P43403 619 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 KRT32Q14532 448 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
SPDEF-202ENST00000544425 ALDH8A1Q9H2A2 487 aaPredicted RBP19.22■□□□□ 0.67
SPDEF-202ENST00000544425 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
SPDEF-202ENST00000544425 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
SPDEF-202ENST00000544425 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
SPDEF-202ENST00000544425 SLC5A1P13866 664 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 MCAMP43121 646 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 AK2P54819 239 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
SPDEF-202ENST00000544425 TRAPPC3LQ5T215 181 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 CCDC102BQ68D86 513 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
SPDEF-202ENST00000544425 LY75O60449 1722 aa19.21■□□□□ 0.67
SPDEF-202ENST00000544425 DDX60Q8IY21 1712 aaKnown RBP19.2■□□□□ 0.66
SPDEF-202ENST00000544425 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 ADRA2BP18089 450 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 SMIM5Q71RC9 77 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 KRT27Q7Z3Y8 459 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 PDRG1Q9NUG6 133 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms