RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RAD50Q92878 1312 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 SF3B3Q15393 1217 aaKnown RBP24.01■■□□□ 1.43
COPS7A-218ENST00000543939 IL17RAQ96F46 866 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 SNRKQ9NRH2 765 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 NDUFB9Q9Y6M9 179 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 ARAP2Q8WZ64 1704 aa24.01■■□□□ 1.43
COPS7A-218ENST00000543939 MROH5Q6ZUA9 1318 aa24■■□□□ 1.43
COPS7A-218ENST00000543939 PDE8BO95263 885 aa24■■□□□ 1.43
COPS7A-218ENST00000543939 NMIQ13287 307 aaPredicted RBP24■■□□□ 1.43
COPS7A-218ENST00000543939 ABCC12Q96J65 1359 aa24■■□□□ 1.43
COPS7A-218ENST00000543939 ANAPC15P60006 121 aa23.99■■□□□ 1.43
COPS7A-218ENST00000543939 CCDC158Q5M9N0 1113 aa23.99■■□□□ 1.43
COPS7A-218ENST00000543939 KIAA1211Q6ZU35 1233 aa23.99■■□□□ 1.43
COPS7A-218ENST00000543939 FAM227BQ96M60 508 aa23.99■■□□□ 1.43
COPS7A-218ENST00000543939 CD2BP2O95400 341 aaKnown RBP23.98■■□□□ 1.43
COPS7A-218ENST00000543939 IFIT1P09914 478 aaKnown RBP23.98■■□□□ 1.43
COPS7A-218ENST00000543939 C3orf67Q6ZVT6 689 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 PROM2Q8N271 834 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 MPHOSPH8Q99549 860 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.98■■□□□ 1.43
COPS7A-218ENST00000543939 HSPA4P34932 840 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 TXNRD1Q16881 649 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 GORABQ5T7V8 394 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 NBPF5PQ86XG9 351 aaPredicted RBP23.98■■□□□ 1.43
COPS7A-218ENST00000543939 TICAM2Q86XR7 235 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 KBTBD3Q8NAB2 608 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 PAG1Q9NWQ8 432 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 PALD1Q9ULE6 856 aa23.98■■□□□ 1.43
COPS7A-218ENST00000543939 EP400Q96L91 3159 aa23.97■■□□□ 1.43
COPS7A-218ENST00000543939 COL4A1P02462 1669 aa23.97■■□□□ 1.43
COPS7A-218ENST00000543939 A0A0D9SFI3 127 aa23.97■■□□□ 1.43
COPS7A-218ENST00000543939 GTF2E1P29083 439 aaPredicted RBP23.97■■□□□ 1.43
COPS7A-218ENST00000543939 IGHMBP2P38935 993 aaKnown RBP23.97■■□□□ 1.43
COPS7A-218ENST00000543939 TTC39AQ5SRH9 613 aa23.97■■□□□ 1.43
COPS7A-218ENST00000543939 HMGB2P26583 209 aaKnown RBP23.96■■□□□ 1.43
COPS7A-218ENST00000543939 SSFA2P28290 1259 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 TPTE2Q6XPS3 522 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 DDX46Q7L014 1031 aaKnown RBP23.96■■□□□ 1.43
COPS7A-218ENST00000543939 CDC5LQ99459 802 aaKnown RBP23.96■■□□□ 1.43
COPS7A-218ENST00000543939 MED23Q9ULK4 1368 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 TAF1P21675 1872 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 AKAP11Q9UKA4 1901 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 GOLIM4O00461 696 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 FGFR2P21802 821 aa23.96■■□□□ 1.43
COPS7A-218ENST00000543939 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
COPS7A-218ENST00000543939 PLSCR1O15162 318 aa23.95■■□□□ 1.42
COPS7A-218ENST00000543939 PUM3Q15397 648 aaKnown RBP23.95■■□□□ 1.42
COPS7A-218ENST00000543939 A0A1B0GUL6 1792 aa23.94■■□□□ 1.42
COPS7A-218ENST00000543939 PTH1RQ03431 593 aa23.94■■□□□ 1.42
COPS7A-218ENST00000543939 NFIXQ14938 502 aa23.94■■□□□ 1.42
COPS7A-218ENST00000543939 HELBQ8NG08 1087 aaPredicted RBP23.94■■□□□ 1.42
COPS7A-218ENST00000543939 LPIN2Q92539 896 aa23.94■■□□□ 1.42
COPS7A-218ENST00000543939 ZNF512BQ96KM6 892 aaPredicted RBP23.94■■□□□ 1.42
COPS7A-218ENST00000543939 CARMIL3Q8ND23 1372 aa23.93■■□□□ 1.42
COPS7A-218ENST00000543939 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
COPS7A-218ENST00000543939 K7ELQ4 463 aaPredicted RBP23.93■■□□□ 1.42
COPS7A-218ENST00000543939 NLRP3Q96P20 1036 aa23.93■■□□□ 1.42
COPS7A-218ENST00000543939 ANTXR1Q9H6X2 564 aa23.93■■□□□ 1.42
COPS7A-218ENST00000543939 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
COPS7A-218ENST00000543939 GYS1P13807 737 aa23.91■■□□□ 1.42
COPS7A-218ENST00000543939 SCARF1Q14162 830 aa23.91■■□□□ 1.42
COPS7A-218ENST00000543939 ANKRD18AQ8IVF6 992 aa23.91■■□□□ 1.42
COPS7A-218ENST00000543939 ANP32EQ9BTT0 268 aa23.91■■□□□ 1.42
COPS7A-218ENST00000543939 TNRC6CQ9HCJ0 1690 aaKnown RBP23.91■■□□□ 1.42
COPS7A-218ENST00000543939 ST18O60284 1047 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 APBA3O96018 575 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 SLC5A1P13866 664 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 MAP4K1Q92918 833 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 SLKQ9H2G2 1235 aaPredicted RBP23.9■■□□□ 1.42
COPS7A-218ENST00000543939 MYH7P12883 1935 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 TAF5LO75529 589 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 FKBP4Q02790 459 aaKnown RBP eCLIP23.9■■□□□ 1.42
COPS7A-218ENST00000543939 CHRNDQ07001 517 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 ZNF589Q86UQ0 364 aaPredicted RBP23.9■■□□□ 1.42
COPS7A-218ENST00000543939 KCNB2Q92953 911 aa23.9■■□□□ 1.42
COPS7A-218ENST00000543939 CHGBP05060 677 aa23.89■■□□□ 1.41
COPS7A-218ENST00000543939 POTEAQ6S8J7 498 aa23.89■■□□□ 1.41
COPS7A-218ENST00000543939 BSDC1Q9NW68 430 aaPredicted RBP23.89■■□□□ 1.41
COPS7A-218ENST00000543939 SNX14Q9Y5W7 946 aa23.89■■□□□ 1.41
COPS7A-218ENST00000543939 ARID4AP29374 1257 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-218ENST00000543939 MCAMP43121 646 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 ZAP70P43403 619 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 MCMDC2Q4G0Z9 681 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 CCDC102BQ68D86 513 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 SPRYD3Q8NCJ5 442 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 FBXO41Q8TF61 875 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 RGPD3A6NKT7 1758 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-218ENST00000543939 RGPD4Q7Z3J3 1758 aa23.88■■□□□ 1.41
COPS7A-218ENST00000543939 PHKA1P46020 1223 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 NECTIN1Q15223 517 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 RASEFQ8IZ41 740 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 UQCRFS1P1P0C7P4 283 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 NEK4P51957 841 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 ZMYM1Q5SVZ6 1142 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 IL27Q8NEV9 243 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 CELF1Q92879 486 aaKnown RBP23.87■■□□□ 1.41
COPS7A-218ENST00000543939 HELLSQ9NRZ9 838 aa23.87■■□□□ 1.41
COPS7A-218ENST00000543939 RBM8AQ9Y5S9 174 aaKnown RBP23.87■■□□□ 1.41
COPS7A-218ENST00000543939 SNAP23O00161 211 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms