RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 USP28Q96RU2 1077 aa27.75■■■□□ 2.03
SHD-201ENST00000543264 CEP57L1Q8IYX8 460 aa27.75■■■□□ 2.03
SHD-201ENST00000543264 ERBB3P21860 1342 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 ERICH4A6NGS2 130 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 PPFIA3O75145 1194 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 CHGBP05060 677 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 NDUFB9Q9Y6M9 179 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 AIMP1Q12904 312 aaKnown RBP27.74■■■□□ 2.03
SHD-201ENST00000543264 FSIP1Q8NA03 581 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 ZNF446Q9NWS9 450 aa27.74■■■□□ 2.03
SHD-201ENST00000543264 ZBTB22O15209 634 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 ME1P48163 572 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 ERCC6LQ2NKX8 1250 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 COL15A1P39059 1388 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 TNRQ92752 1358 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 CCDC66A2RUB6 948 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 PRAMEF22A3QJZ6 481 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 SLFNL1Q499Z3 407 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 NBPF6Q5VWK0 638 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 NBPF4Q96M43 638 aa27.73■■■□□ 2.03
SHD-201ENST00000543264 RGPD8O14715 1765 aaPredicted RBP27.73■■■□□ 2.03
SHD-201ENST00000543264 GSDMDP57764 484 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 FAM160A1Q05DH4 1040 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 ENGASEQ8NFI3 743 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 BBXQ8WY36 941 aaPredicted RBP27.72■■■□□ 2.03
SHD-201ENST00000543264 SEC62Q99442 399 aaKnown RBP27.72■■■□□ 2.03
SHD-201ENST00000543264 KIF2AO00139 706 aaPredicted RBP27.72■■■□□ 2.03
SHD-201ENST00000543264 CYP21A2P08686 494 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 NBPF11Q86T75 865 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 LINS1Q8NG48 757 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 SMARCC2Q8TAQ2 1214 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 JCADQ9P266 1359 aa27.72■■■□□ 2.03
SHD-201ENST00000543264 GUCY1B3Q02153 619 aa27.71■■■□□ 2.03
SHD-201ENST00000543264 SETD1BQ9UPS6 1966 aaKnown RBP27.71■■■□□ 2.03
SHD-201ENST00000543264 E4F1Q66K89 784 aaPredicted RBP27.71■■■□□ 2.03
SHD-201ENST00000543264 NAT10Q9H0A0 1025 aaKnown RBP27.71■■■□□ 2.03
SHD-201ENST00000543264 ZNF530Q6P9A1 599 aaPredicted RBP27.7■■■□□ 2.03
SHD-201ENST00000543264 SYT10Q6XYQ8 523 aa27.7■■■□□ 2.03
SHD-201ENST00000543264 NSUN7Q8NE18 718 aaKnown RBP27.7■■■□□ 2.03
SHD-201ENST00000543264 SDF4Q9BRK5 362 aa27.7■■■□□ 2.03
SHD-201ENST00000543264 CCT2P78371 535 aaKnown RBP27.7■■■□□ 2.02
SHD-201ENST00000543264 NAA16Q6N069 864 aaPredicted RBP27.7■■■□□ 2.02
SHD-201ENST00000543264 KCND1Q9NSA2 647 aa27.7■■■□□ 2.02
SHD-201ENST00000543264 LRRN4CLQ8ND94 238 aa27.69■■■□□ 2.02
SHD-201ENST00000543264 ZNF396Q96N95 335 aaPredicted RBP27.69■■■□□ 2.02
SHD-201ENST00000543264 NAP1L2Q9ULW6 460 aaPredicted RBP27.69■■■□□ 2.02
SHD-201ENST00000543264 U3KPZ7 1027 aaPredicted RBP27.69■■■□□ 2.02
SHD-201ENST00000543264 PTPDC1A2A3K4 754 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 PFKFB2O60825 505 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 SMC2O95347 1197 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 PPP1R13BQ96KQ4 1090 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 LLPHQ9BRT6 129 aaKnown RBP27.68■■■□□ 2.02
SHD-201ENST00000543264 OSBPL5Q9H0X9 879 aaPredicted RBP27.68■■■□□ 2.02
SHD-201ENST00000543264 CTDNEP1O95476 244 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 APOBRQ0VD83 1088 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 BMS1Q14692 1282 aaKnown RBP27.68■■■□□ 2.02
SHD-201ENST00000543264 TMC6Q7Z403 805 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 TMEM51Q9NW97 253 aa27.68■■■□□ 2.02
SHD-201ENST00000543264 DNAJC2Q99543 621 aaKnown RBP27.67■■■□□ 2.02
SHD-201ENST00000543264 XPO4Q9C0E2 1151 aaKnown RBP27.66■■■□□ 2.02
SHD-201ENST00000543264 L2HGDHQ9H9P8 463 aa27.66■■■□□ 2.02
SHD-201ENST00000543264 IFNKQ9P0W0 207 aa27.66■■■□□ 2.02
SHD-201ENST00000543264 IMPACTQ9P2X3 320 aa27.66■■■□□ 2.02
SHD-201ENST00000543264 STOX1Q6ZVD7 989 aa27.66■■■□□ 2.02
SHD-201ENST00000543264 NCOA5Q9HCD5 579 aaKnown RBP27.66■■■□□ 2.02
SHD-201ENST00000543264 A0A1B0GVL5 298 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 H2AFXP16104 143 aaPredicted RBP27.65■■■□□ 2.02
SHD-201ENST00000543264 ZRSR1Q15695 479 aaKnown RBP27.65■■■□□ 2.02
SHD-201ENST00000543264 ARMCX5Q6P1M9 558 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 FMNL2Q96PY5 1086 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 NOL10Q9BSC4 688 aaKnown RBP27.65■■■□□ 2.02
SHD-201ENST00000543264 PLEKHG1Q9ULL1 1385 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 AKAP4Q5JQC9 854 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 KDM3BQ7LBC6 1761 aa27.65■■■□□ 2.02
SHD-201ENST00000543264 UTYO14607 1347 aa27.64■■■□□ 2.02
SHD-201ENST00000543264 DBNLQ9UJU6 430 aaKnown RBP27.64■■■□□ 2.02
SHD-201ENST00000543264 PCDHA7Q9UN72 937 aa27.64■■■□□ 2.02
SHD-201ENST00000543264 GTF2E1P29083 439 aaPredicted RBP27.64■■■□□ 2.02
SHD-201ENST00000543264 GORABQ5T7V8 394 aa27.64■■■□□ 2.02
SHD-201ENST00000543264 TIGD1Q96MW7 591 aa27.64■■■□□ 2.02
SHD-201ENST00000543264 DDX58O95786 925 aaKnown RBP27.63■■■□□ 2.01
SHD-201ENST00000543264 ATP5JP18859 108 aa27.63■■■□□ 2.01
SHD-201ENST00000543264 SFPQP23246 707 aaKnown RBP eCLIP27.63■■■□□ 2.01
SHD-201ENST00000543264 CLCN6P51797 869 aa27.63■■■□□ 2.01
SHD-201ENST00000543264 DPCR1Q3MIW9 517 aa27.63■■■□□ 2.01
SHD-201ENST00000543264 MCMDC2Q4G0Z9 681 aa27.63■■■□□ 2.01
SHD-201ENST00000543264 FMR1NBQ8N0W7 255 aaPredicted RBP27.63■■■□□ 2.01
SHD-201ENST00000543264 MRPS27Q92552 414 aaKnown RBP27.63■■■□□ 2.01
SHD-201ENST00000543264 MED1Q15648 1581 aaPredicted RBP27.63■■■□□ 2.01
SHD-201ENST00000543264 ZNF609O15014 1411 aa27.63■■■□□ 2.01
SHD-201ENST00000543264 IGKV5-2P06315 115 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 EPHA10Q5JZY3 1008 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 DHX32Q7L7V1 743 aaKnown RBP27.62■■■□□ 2.01
SHD-201ENST00000543264 RIC3Q7Z5B4 369 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 HOMER1Q86YM7 354 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 ARHGAP29Q52LW3 1261 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 CCDC93Q567U6 631 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 ATL3Q6DD88 541 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 ILDR1Q86SU0 546 aaPredicted RBP27.62■■■□□ 2.01
SHD-201ENST00000543264 CCDC150Q8NCX0 1101 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms