RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 LRP10Q7Z4F1 713 aa12.45□□□□□ -0.42
C2CD3-219ENST00000542930 NLRP10Q86W26 655 aa12.45□□□□□ -0.42
C2CD3-219ENST00000542930 TRMT112Q9UI30 125 aaKnown RBP12.45□□□□□ -0.42
C2CD3-219ENST00000542930 LAMB2P55268 1798 aa12.45□□□□□ -0.42
C2CD3-219ENST00000542930 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
C2CD3-219ENST00000542930 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
C2CD3-219ENST00000542930 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
C2CD3-219ENST00000542930 GPSM2P81274 684 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 CNGB1Q14028 1251 aaPredicted RBP12.43□□□□□ -0.42
C2CD3-219ENST00000542930 AGBL3Q8NEM8 1001 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
C2CD3-219ENST00000542930 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
C2CD3-219ENST00000542930 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 TRIM17Q9Y577 477 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 ZNF609O15014 1411 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
C2CD3-219ENST00000542930 TAF1P21675 1872 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 ALDH1A1P00352 501 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 PDIA6Q15084 440 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
C2CD3-219ENST00000542930 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
C2CD3-219ENST00000542930 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
C2CD3-219ENST00000542930 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
C2CD3-219ENST00000542930 DDX60Q8IY21 1712 aaKnown RBP12.42□□□□□ -0.42
C2CD3-219ENST00000542930 RANBP2P49792 3224 aaKnown RBP12.41□□□□□ -0.42
C2CD3-219ENST00000542930 EN2P19622 333 aaPredicted RBP12.41□□□□□ -0.42
C2CD3-219ENST00000542930 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
C2CD3-219ENST00000542930 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
C2CD3-219ENST00000542930 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
C2CD3-219ENST00000542930 SCN9AQ15858 1988 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 G3V3G9 751 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 DLL1O00548 723 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 USP17L8P0C7I0 530 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 NF2P35240 595 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
C2CD3-219ENST00000542930 DCAF8Q5TAQ9 597 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 PRAMEF18Q5VWM3 479 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 ARMC5Q96C12 935 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 GMLQ99445 158 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
C2CD3-219ENST00000542930 RBBP6Q7Z6E9 1792 aaKnown RBP12.4□□□□□ -0.42
C2CD3-219ENST00000542930 COL6A3P12111 3177 aa12.4□□□□□ -0.42
C2CD3-219ENST00000542930 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
C2CD3-219ENST00000542930 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
C2CD3-219ENST00000542930 INHBEP58166 350 aa12.39□□□□□ -0.43
C2CD3-219ENST00000542930 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
C2CD3-219ENST00000542930 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
C2CD3-219ENST00000542930 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
C2CD3-219ENST00000542930 CEP290O15078 2479 aa12.38□□□□□ -0.43
C2CD3-219ENST00000542930 ANXA1P04083 346 aa12.38□□□□□ -0.43
C2CD3-219ENST00000542930 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
C2CD3-219ENST00000542930 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
C2CD3-219ENST00000542930 SPRYD7Q5W111 196 aa12.38□□□□□ -0.43
C2CD3-219ENST00000542930 MANSC4A6NHS7 340 aaPredicted RBP12.37□□□□□ -0.43
C2CD3-219ENST00000542930 UFL1O94874 794 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 NEFMP07197 916 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
C2CD3-219ENST00000542930 NBPF9Q3BBW0 867 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
C2CD3-219ENST00000542930 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
C2CD3-219ENST00000542930 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
C2CD3-219ENST00000542930 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
C2CD3-219ENST00000542930 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
C2CD3-219ENST00000542930 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 PODNQ7Z5L7 613 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 COL4A1P02462 1669 aa12.35□□□□□ -0.43
C2CD3-219ENST00000542930 H0YGN5 161 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 WNT10BO00744 389 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 ZBTB48P10074 688 aaPredicted RBP12.34□□□□□ -0.43
C2CD3-219ENST00000542930 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
C2CD3-219ENST00000542930 DLG5Q8TDM6 1919 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 PSME4Q14997 1843 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
C2CD3-219ENST00000542930 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 PRKG1Q13976 671 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
C2CD3-219ENST00000542930 ANGEL1Q9UNK9 670 aaKnown RBP12.33□□□□□ -0.44
C2CD3-219ENST00000542930 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
C2CD3-219ENST00000542930 MMP14P50281 582 aa12.32□□□□□ -0.44
C2CD3-219ENST00000542930 SP3Q02447 781 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms