RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
SCG3-202ENST00000542355 PLSCR1O15162 318 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 MPHOSPH8Q99549 860 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
SCG3-202ENST00000542355 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 EDC3Q96F86 508 aaKnown RBP13.38□□□□□ -0.27
SCG3-202ENST00000542355 IL25Q9H293 177 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
SCG3-202ENST00000542355 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 DNAJC2Q99543 621 aaKnown RBP13.37□□□□□ -0.27
SCG3-202ENST00000542355 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 NPHP1O15259 732 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 XAGE2Q96GT9 111 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 KIF2CQ99661 725 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
SCG3-202ENST00000542355 PDE8BO95263 885 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 SSFA2P28290 1259 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 ADORA1P30542 326 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
SCG3-202ENST00000542355 NFIXQ14938 502 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 HAUS7Q99871 368 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 ZNF609O15014 1411 aa13.36□□□□□ -0.27
SCG3-202ENST00000542355 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
SCG3-202ENST00000542355 BECN1Q14457 450 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
SCG3-202ENST00000542355 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 HELBQ8NG08 1087 aaPredicted RBP13.35□□□□□ -0.27
SCG3-202ENST00000542355 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 SGSM2O43147 1006 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
SCG3-202ENST00000542355 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 MROH5Q6ZUA9 1318 aa13.35□□□□□ -0.27
SCG3-202ENST00000542355 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
SCG3-202ENST00000542355 GYS1P13807 737 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 RUFY2Q8WXA3 655 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
SCG3-202ENST00000542355 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 HIP1O00291 1037 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 TAF5LO75529 589 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
SCG3-202ENST00000542355 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
SCG3-202ENST00000542355 TUBGCP6Q96RT7 1819 aa13.33□□□□□ -0.27
SCG3-202ENST00000542355 GOLIM4O00461 696 aa13.33□□□□□ -0.28
SCG3-202ENST00000542355 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
SCG3-202ENST00000542355 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
SCG3-202ENST00000542355 SNAP23O00161 211 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 ZNF827Q17R98 1081 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCG3-202ENST00000542355 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
SCG3-202ENST00000542355 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
SCG3-202ENST00000542355 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
SCG3-202ENST00000542355 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 LPIN2Q92539 896 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 PAG1Q9NWQ8 432 aa13.32□□□□□ -0.28
SCG3-202ENST00000542355 CHRNDQ07001 517 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCG3-202ENST00000542355 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
SCG3-202ENST00000542355 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 SNRKQ9NRH2 765 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 CHGBP05060 677 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 FGFR2P21802 821 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 MCCP23508 829 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
SCG3-202ENST00000542355 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
SCG3-202ENST00000542355 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
SCG3-202ENST00000542355 MYH3P11055 1940 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 A0A0D9SFI3 127 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 TM4SF1P30408 202 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 SCARF1Q14162 830 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
SCG3-202ENST00000542355 SERPINB2P05120 415 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 SLC5A1P13866 664 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
SCG3-202ENST00000542355 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 COL23A1Q86Y22 540 aaPredicted RBP13.3□□□□□ -0.28
SCG3-202ENST00000542355 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 PALD1Q9ULE6 856 aa13.3□□□□□ -0.28
SCG3-202ENST00000542355 EPB41L2O43491 1005 aaKnown RBP13.29□□□□□ -0.28
SCG3-202ENST00000542355 ZAP70P43403 619 aa13.29□□□□□ -0.28
SCG3-202ENST00000542355 RABEP1Q15276 862 aa13.29□□□□□ -0.28
SCG3-202ENST00000542355 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
SCG3-202ENST00000542355 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms