RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 LINS1Q8NG48 757 aa25.79■■□□□ 1.72
DDB1-220ENST00000542337 LRRC37AA6NMS7 1700 aa25.79■■□□□ 1.72
DDB1-220ENST00000542337 ADAMTSL1Q8N6G6 1762 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 DPF2Q92785 391 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 SPINK5Q9NQ38 1064 aaPredicted RBP25.78■■□□□ 1.72
DDB1-220ENST00000542337 XDHP47989 1333 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 CNTNAP1P78357 1384 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 DUOX1Q9NRD9 1551 aa25.78■■□□□ 1.72
DDB1-220ENST00000542337 PSMD14O00487 310 aa25.77■■□□□ 1.72
DDB1-220ENST00000542337 ATP2B4P23634 1241 aa25.77■■□□□ 1.72
DDB1-220ENST00000542337 RPS12P25398 132 aaKnown RBP25.77■■□□□ 1.72
DDB1-220ENST00000542337 ZC3H15Q8WU90 426 aaKnown RBP25.77■■□□□ 1.72
DDB1-220ENST00000542337 GREM2Q9H772 168 aa25.77■■□□□ 1.72
DDB1-220ENST00000542337 ABT1Q9ULW3 272 aaKnown RBP25.77■■□□□ 1.72
DDB1-220ENST00000542337 IGHMBP2P38935 993 aaKnown RBP25.76■■□□□ 1.71
DDB1-220ENST00000542337 GPR101Q96P66 508 aaPredicted RBP25.76■■□□□ 1.71
DDB1-220ENST00000542337 BSDC1Q9NW68 430 aaPredicted RBP25.76■■□□□ 1.71
DDB1-220ENST00000542337 LTBP1Q14766 1721 aa25.76■■□□□ 1.71
DDB1-220ENST00000542337 RTL9Q8NET4 1388 aa25.75■■□□□ 1.71
DDB1-220ENST00000542337 HSPA1AP0DMV8 641 aaKnown RBP25.75■■□□□ 1.71
DDB1-220ENST00000542337 HSPA1BP0DMV9 641 aaKnown RBP25.75■■□□□ 1.71
DDB1-220ENST00000542337 DEFB115Q30KQ5 88 aa25.75■■□□□ 1.71
DDB1-220ENST00000542337 MICALL2Q8IY33 904 aa25.75■■□□□ 1.71
DDB1-220ENST00000542337 PLA2G12BQ9BX93 195 aa25.75■■□□□ 1.71
DDB1-220ENST00000542337 ZBTB12Q9Y330 459 aaPredicted RBP25.75■■□□□ 1.71
DDB1-220ENST00000542337 PGAP2Q9UHJ9 254 aa25.73■■□□□ 1.71
DDB1-220ENST00000542337 RASSF10A6NK89 507 aa25.72■■□□□ 1.71
DDB1-220ENST00000542337 VEGFBP49765 207 aa25.72■■□□□ 1.71
DDB1-220ENST00000542337 MPHOSPH8Q99549 860 aa25.72■■□□□ 1.71
DDB1-220ENST00000542337 MINPP1Q9UNW1 487 aa25.72■■□□□ 1.71
DDB1-220ENST00000542337 COL4A1P02462 1669 aa25.71■■□□□ 1.71
DDB1-220ENST00000542337 TRAF5O00463 557 aa25.71■■□□□ 1.71
DDB1-220ENST00000542337 CDC37L1Q7L3B6 337 aa25.71■■□□□ 1.71
DDB1-220ENST00000542337 TRPM4Q8TD43 1214 aa25.71■■□□□ 1.71
DDB1-220ENST00000542337 KCNQ5Q9NR82 932 aa25.71■■□□□ 1.71
DDB1-220ENST00000542337 F6X3S4 739 aa25.7■■□□□ 1.7
DDB1-220ENST00000542337 VIL1P09327 827 aaKnown RBP25.7■■□□□ 1.7
DDB1-220ENST00000542337 ITGA6P23229 1130 aa25.7■■□□□ 1.7
DDB1-220ENST00000542337 HIRAP54198 1017 aaPredicted RBP25.7■■□□□ 1.7
DDB1-220ENST00000542337 CSF1RP07333 972 aa25.69■■□□□ 1.7
DDB1-220ENST00000542337 CASP7P55210 303 aa25.69■■□□□ 1.7
DDB1-220ENST00000542337 BEND3Q5T5X7 828 aa25.69■■□□□ 1.7
DDB1-220ENST00000542337 PODNQ7Z5L7 613 aa25.69■■□□□ 1.7
DDB1-220ENST00000542337 ANKRD2Q9GZV1 360 aa25.69■■□□□ 1.7
DDB1-220ENST00000542337 SHTN1A0MZ66 631 aa25.68■■□□□ 1.7
DDB1-220ENST00000542337 CCT4P50991 539 aaKnown RBP25.68■■□□□ 1.7
DDB1-220ENST00000542337 FMR1Q06787 632 aaKnown RBP eCLIP25.68■■□□□ 1.71e-7■■□□□ 14.5
DDB1-220ENST00000542337 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
DDB1-220ENST00000542337 RBM26Q5T8P6 1007 aaKnown RBP25.68■■□□□ 1.7
DDB1-220ENST00000542337 PAXIP1Q6ZW49 1069 aaPredicted RBP25.68■■□□□ 1.7
DDB1-220ENST00000542337 SAMD7Q7Z3H4 446 aa25.68■■□□□ 1.7
DDB1-220ENST00000542337 AIDAQ96BJ3 306 aa25.68■■□□□ 1.7
DDB1-220ENST00000542337 GLIS2Q9BZE0 524 aaPredicted RBP25.68■■□□□ 1.7
DDB1-220ENST00000542337 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 ANKRD18BA2A2Z9 1011 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 E9PSI1 815 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 CELF2O95319 508 aaKnown RBP25.67■■□□□ 1.7
DDB1-220ENST00000542337 ECE1P42892 770 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 TBC1D10BQ4KMP7 808 aaPredicted RBP25.67■■□□□ 1.7
DDB1-220ENST00000542337 LEMD3Q9Y2U8 911 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 CHMP3Q9Y3E7 222 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 CACNA1FO60840 1977 aa25.67■■□□□ 1.7
DDB1-220ENST00000542337 PCNTO95613 3336 aa25.66■■□□□ 1.7
DDB1-220ENST00000542337 CST9Q5W186 159 aa25.66■■□□□ 1.7
DDB1-220ENST00000542337 RSBN1LQ6PCB5 846 aaPredicted RBP25.66■■□□□ 1.7
DDB1-220ENST00000542337 SLC4A10Q6U841 1118 aa25.66■■□□□ 1.7
DDB1-220ENST00000542337 AGBL3Q8NEM8 1001 aa25.66■■□□□ 1.7
DDB1-220ENST00000542337 C9orf78Q9NZ63 289 aaPredicted RBP25.66■■□□□ 1.7
DDB1-220ENST00000542337 WDR33Q9C0J8 1336 aaKnown RBP25.65■■□□□ 1.7
DDB1-220ENST00000542337 USP17L3A6NCW0 530 aa25.65■■□□□ 1.7
DDB1-220ENST00000542337 USP17L4A6NCW7 530 aa25.65■■□□□ 1.7
DDB1-220ENST00000542337 IFIT5Q13325 482 aaKnown RBP25.65■■□□□ 1.7
DDB1-220ENST00000542337 USP17L1Q7RTZ2 530 aa25.65■■□□□ 1.7
DDB1-220ENST00000542337 DCPSQ96C86 337 aaKnown RBP25.65■■□□□ 1.7
DDB1-220ENST00000542337 ALDH1L1O75891 902 aa25.64■■□□□ 1.7
DDB1-220ENST00000542337 KCNJ4P48050 445 aa25.64■■□□□ 1.7
DDB1-220ENST00000542337 COL13A1Q5TAT6 717 aaPredicted RBP25.64■■□□□ 1.7
DDB1-220ENST00000542337 USP48Q86UV5 1035 aa25.64■■□□□ 1.7
DDB1-220ENST00000542337 ZNF408Q9H9D4 720 aa25.64■■□□□ 1.7
DDB1-220ENST00000542337 TLL2Q9Y6L7 1015 aa25.64■■□□□ 1.7
DDB1-220ENST00000542337 MED23Q9ULK4 1368 aa25.64■■□□□ 1.69
DDB1-220ENST00000542337 GRM8O00222 908 aa25.63■■□□□ 1.69
DDB1-220ENST00000542337 KIF4BQ2VIQ3 1234 aa25.63■■□□□ 1.69
DDB1-220ENST00000542337 SRCIN1Q9C0H9 1055 aa25.63■■□□□ 1.69
DDB1-220ENST00000542337 MAP2K1Q02750 393 aaPredicted RBP25.62■■□□□ 1.69
DDB1-220ENST00000542337 COA1Q9GZY4 146 aa25.62■■□□□ 1.69
DDB1-220ENST00000542337 ZNF804BA4D1E1 1349 aa25.62■■□□□ 1.69
DDB1-220ENST00000542337 FOXO4P98177 505 aa25.61■■□□□ 1.69
DDB1-220ENST00000542337 TAF7LQ5H9L4 462 aa25.61■■□□□ 1.69
DDB1-220ENST00000542337 KRT26Q7Z3Y9 468 aa25.61■■□□□ 1.69
DDB1-220ENST00000542337 CAPNS2Q96L46 248 aa25.61■■□□□ 1.69
DDB1-220ENST00000542337 MYH3P11055 1940 aa25.61■■□□□ 1.69
DDB1-220ENST00000542337 USP17L8P0C7I0 530 aa25.6■■□□□ 1.69
DDB1-220ENST00000542337 GRM1Q13255 1194 aa25.6■■□□□ 1.69
DDB1-220ENST00000542337 CCDC57Q2TAC2 916 aa25.6■■□□□ 1.69
DDB1-220ENST00000542337 FBXW7Q969H0 707 aa25.6■■□□□ 1.69
DDB1-220ENST00000542337 WTIPA6NIX2 430 aaPredicted RBP25.59■■□□□ 1.69
DDB1-220ENST00000542337 EGFRP00533 1210 aa25.59■■□□□ 1.69
DDB1-220ENST00000542337 ZNF280AP59817 542 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms