RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
CHFR-220ENST00000541817 CNGB1Q14028 1251 aaPredicted RBP13.06□□□□□ -0.32
CHFR-220ENST00000541817 SLC4A8Q2Y0W8 1093 aa13.06□□□□□ -0.32
CHFR-220ENST00000541817 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
CHFR-220ENST00000541817 DPF3Q92784 378 aa13.06□□□□□ -0.32
CHFR-220ENST00000541817 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
CHFR-220ENST00000541817 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
CHFR-220ENST00000541817 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
CHFR-220ENST00000541817 GPSM2P81274 684 aa13.05□□□□□ -0.32
CHFR-220ENST00000541817 GRAPQ13588 217 aa13.05□□□□□ -0.32
CHFR-220ENST00000541817 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
CHFR-220ENST00000541817 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
CHFR-220ENST00000541817 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
CHFR-220ENST00000541817 UTP14AQ9BVJ6 771 aaKnown RBP13.05□□□□□ -0.32
CHFR-220ENST00000541817 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
CHFR-220ENST00000541817 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
CHFR-220ENST00000541817 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
CHFR-220ENST00000541817 ZNF333Q96JL9 665 aa13.04□□□□□ -0.32
CHFR-220ENST00000541817 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
CHFR-220ENST00000541817 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
CHFR-220ENST00000541817 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
CHFR-220ENST00000541817 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
CHFR-220ENST00000541817 COL4A1P02462 1669 aa13.03□□□□□ -0.32
CHFR-220ENST00000541817 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHFR-220ENST00000541817 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
CHFR-220ENST00000541817 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
CHFR-220ENST00000541817 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
CHFR-220ENST00000541817 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
CHFR-220ENST00000541817 CEP290O15078 2479 aa13.02□□□□□ -0.32
CHFR-220ENST00000541817 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
CHFR-220ENST00000541817 ZNF280AP59817 542 aaPredicted RBP13.02□□□□□ -0.33
CHFR-220ENST00000541817 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
CHFR-220ENST00000541817 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.33
CHFR-220ENST00000541817 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
CHFR-220ENST00000541817 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.33
CHFR-220ENST00000541817 MYOZ2Q9NPC6 264 aa13.02□□□□□ -0.33
CHFR-220ENST00000541817 ZNF609O15014 1411 aa13.02□□□□□ -0.33
CHFR-220ENST00000541817 PARP10Q53GL7 1025 aa13.01□□□□□ -0.33
CHFR-220ENST00000541817 RTF1Q92541 710 aaKnown RBP13.01□□□□□ -0.33
CHFR-220ENST00000541817 PTCH2Q9Y6C5 1203 aa13.01□□□□□ -0.33
CHFR-220ENST00000541817 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
CHFR-220ENST00000541817 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
CHFR-220ENST00000541817 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
CHFR-220ENST00000541817 G3V3G9 751 aa13□□□□□ -0.33
CHFR-220ENST00000541817 ALDH1A1P00352 501 aa13□□□□□ -0.33
CHFR-220ENST00000541817 ANXA1P04083 346 aa13□□□□□ -0.33
CHFR-220ENST00000541817 CRHR2Q13324 411 aa13□□□□□ -0.33
CHFR-220ENST00000541817 SLC9C1Q4G0N8 1177 aa13□□□□□ -0.33
CHFR-220ENST00000541817 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
CHFR-220ENST00000541817 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
CHFR-220ENST00000541817 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
CHFR-220ENST00000541817 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
CHFR-220ENST00000541817 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
CHFR-220ENST00000541817 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
CHFR-220ENST00000541817 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
CHFR-220ENST00000541817 PRO3102Q9H379 93 aa12.99□□□□□ -0.33
CHFR-220ENST00000541817 ANGEL1Q9UNK9 670 aaKnown RBP12.99□□□□□ -0.33
CHFR-220ENST00000541817 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 MANSC4A6NHS7 340 aaPredicted RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 NF2P35240 595 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 SP3Q02447 781 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 Q7L0L9 218 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 CLMNQ96JQ2 1002 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 EYA3Q99504 573 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 MXD3Q9BW11 206 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 ZC3H12CQ9C0D7 883 aaKnown RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
CHFR-220ENST00000541817 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
CHFR-220ENST00000541817 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
CHFR-220ENST00000541817 ECM2O94769 699 aaPredicted RBP12.97□□□□□ -0.33
CHFR-220ENST00000541817 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 SLC10A4Q96EP9 437 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 GMLQ99445 158 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 ZSWIM8A7E2V4 1837 aa12.97□□□□□ -0.33
CHFR-220ENST00000541817 SASH1O94885 1247 aa12.96□□□□□ -0.33
CHFR-220ENST00000541817 HSPA5P11021 654 aaKnown RBP12.96□□□□□ -0.33
CHFR-220ENST00000541817 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
CHFR-220ENST00000541817 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
CHFR-220ENST00000541817 SHISA4Q96DD7 197 aa12.96□□□□□ -0.33
CHFR-220ENST00000541817 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
CHFR-220ENST00000541817 UFL1O94874 794 aa12.95□□□□□ -0.34
CHFR-220ENST00000541817 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
CHFR-220ENST00000541817 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
CHFR-220ENST00000541817 TMC4Q7Z404 712 aa12.95□□□□□ -0.34
CHFR-220ENST00000541817 PTPN18Q99952 460 aa12.95□□□□□ -0.34
CHFR-220ENST00000541817 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
CHFR-220ENST00000541817 GJA5P36382 358 aa12.94□□□□□ -0.34
CHFR-220ENST00000541817 INHBEP58166 350 aa12.94□□□□□ -0.34
CHFR-220ENST00000541817 EIF4A1P60842 406 aaKnown RBP12.94□□□□□ -0.34
CHFR-220ENST00000541817 AIMP1Q12904 312 aaKnown RBP12.94□□□□□ -0.34
CHFR-220ENST00000541817 MTFR1Q15390 333 aa12.94□□□□□ -0.34
CHFR-220ENST00000541817 PSME4Q14997 1843 aa12.93□□□□□ -0.34
CHFR-220ENST00000541817 WNT10BO00744 389 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms