RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 AKAP4Q5JQC9 854 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
LMO3-226ENST00000541589 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
LMO3-226ENST00000541589 CLUAP1Q96AJ1 413 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 MASTLQ96GX5 879 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
LMO3-226ENST00000541589 BEGAINQ9BUH8 593 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
LMO3-226ENST00000541589 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
LMO3-226ENST00000541589 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 A0A087WZG4 1122 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 TRIM27P14373 513 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 FKBP4Q02790 459 aaKnown RBP eCLIP10.32□□□□□ -0.76
LMO3-226ENST00000541589 MVPQ14764 893 aaKnown RBP10.32□□□□□ -0.76
LMO3-226ENST00000541589 CCDC93Q567U6 631 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 CYP4F22Q6NT55 531 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
LMO3-226ENST00000541589 ARHGAP45Q92619 1136 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 TNNQ9UQP3 1299 aa10.32□□□□□ -0.76
LMO3-226ENST00000541589 RNMTO43148 476 aaKnown RBP10.31□□□□□ -0.76
LMO3-226ENST00000541589 MAP2K2P36507 400 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 FMR1Q06787 632 aaKnown RBP eCLIP10.31□□□□□ -0.76
LMO3-226ENST00000541589 CST9Q5W186 159 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
LMO3-226ENST00000541589 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 ZNF277Q9NRM2 450 aaPredicted RBP10.31□□□□□ -0.76
LMO3-226ENST00000541589 TSPYL4Q9UJ04 414 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
LMO3-226ENST00000541589 CA12O43570 354 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 DSG2Q14126 1118 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 GPC2Q8N158 579 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 DDX19BQ9UMR2 479 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 TLL2Q9Y6L7 1015 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 PDE4DIPQ5VU43 2346 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 CEMIPQ8WUJ3 1361 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
LMO3-226ENST00000541589 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
LMO3-226ENST00000541589 STARD3NLO95772 234 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 IL17REQ8NFR9 667 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 TBC1D2BQ9UPU7 963 aa10.3□□□□□ -0.76
LMO3-226ENST00000541589 SNED1Q8TER0 1413 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
LMO3-226ENST00000541589 AOC2O75106 756 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 CAMTA2O94983 1202 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
LMO3-226ENST00000541589 ST5P78524 1137 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 TAF7Q15545 349 aaPredicted RBP10.29□□□□□ -0.76
LMO3-226ENST00000541589 OLFM4Q6UX06 510 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 SETDB2Q96T68 719 aa10.29□□□□□ -0.76
LMO3-226ENST00000541589 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
LMO3-226ENST00000541589 NPR1P16066 1061 aa10.28□□□□□ -0.76
LMO3-226ENST00000541589 IL6STP40189 918 aaPredicted RBP10.28□□□□□ -0.76
LMO3-226ENST00000541589 DGKZQ13574 1117 aa10.28□□□□□ -0.76
LMO3-226ENST00000541589 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
LMO3-226ENST00000541589 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
LMO3-226ENST00000541589 RTKN2Q8IZC4 609 aa10.28□□□□□ -0.76
LMO3-226ENST00000541589 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
LMO3-226ENST00000541589 CHMP4BQ9H444 224 aaKnown RBP10.28□□□□□ -0.76
LMO3-226ENST00000541589 CACNA1SQ13698 1873 aa10.27□□□□□ -0.76
LMO3-226ENST00000541589 ABCC4O15439 1325 aa10.27□□□□□ -0.76
LMO3-226ENST00000541589 TRAF5O00463 557 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 SCNN1DP51172 638 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 GRM1Q13255 1194 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 KRT24Q2M2I5 525 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 SAPCD2Q86UD0 394 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 SYNE4Q8N205 404 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 HHIPL1Q96JK4 782 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
LMO3-226ENST00000541589 EPS15P42566 896 aa10.26□□□□□ -0.77
LMO3-226ENST00000541589 PRPF38BQ5VTL8 546 aaKnown RBP10.26□□□□□ -0.77
LMO3-226ENST00000541589 ZNF496Q96IT1 587 aaPredicted RBP10.26□□□□□ -0.77
LMO3-226ENST00000541589 PSMD1Q99460 953 aa10.26□□□□□ -0.77
LMO3-226ENST00000541589 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
LMO3-226ENST00000541589 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
LMO3-226ENST00000541589 COL4A5P29400 1685 aa10.26□□□□□ -0.77
LMO3-226ENST00000541589 PTPRCP08575 1304 aa10.26□□□□□ -0.77
LMO3-226ENST00000541589 IGHDP01880 384 aa10.25□□□□□ -0.77
LMO3-226ENST00000541589 USP50Q70EL3 339 aaPredicted RBP10.25□□□□□ -0.77
LMO3-226ENST00000541589 RWDD1Q9H446 243 aaPredicted RBP10.25□□□□□ -0.77
LMO3-226ENST00000541589 RBM19Q9Y4C8 960 aaKnown RBP10.25□□□□□ -0.77
LMO3-226ENST00000541589 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
LMO3-226ENST00000541589 CASP8AP2Q9UKL3 1982 aa10.25□□□□□ -0.77
LMO3-226ENST00000541589 KDM3BQ7LBC6 1761 aa10.25□□□□□ -0.77
LMO3-226ENST00000541589 NPHP1O15259 732 aa10.24□□□□□ -0.77
LMO3-226ENST00000541589 A1BGP04217 495 aa10.24□□□□□ -0.77
LMO3-226ENST00000541589 TEFQ10587 303 aa10.24□□□□□ -0.77
LMO3-226ENST00000541589 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
LMO3-226ENST00000541589 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
LMO3-226ENST00000541589 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
LMO3-226ENST00000541589 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
LMO3-226ENST00000541589 TRPM7Q96QT4 1865 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms