RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 OR13H1Q8NG92 308 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 NSUN5Q96P11 429 aaKnown RBP7.31□□□□□ -1.24
SNHG1-217ENST00000541578 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 SMG9Q9H0W8 520 aaKnown RBP7.31□□□□□ -1.24
SNHG1-217ENST00000541578 RBSNQ9H1K0 784 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 ELP3Q9H9T3 547 aa7.31□□□□□ -1.24
SNHG1-217ENST00000541578 C1QTNF9BB2RNN3 333 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 APBA3O96018 575 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 MZF1P28698 734 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-217ENST00000541578 RAC1P63000 192 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 HYAL2Q12891 473 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 CD163Q86VB7 1156 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 DMRTC2Q8IXT2 367 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-217ENST00000541578 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
SNHG1-217ENST00000541578 ABI2Q9NYB9 513 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-217ENST00000541578 PDGFAP04085 211 aa7.29□□□□□ -1.24
SNHG1-217ENST00000541578 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
SNHG1-217ENST00000541578 ZNF438Q7Z4V0 828 aa7.29□□□□□ -1.24
SNHG1-217ENST00000541578 ANO2Q9NQ90 1003 aa7.29□□□□□ -1.24
SNHG1-217ENST00000541578 A0A0A0MRY4 1105 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-217ENST00000541578 GRIK5Q16478 980 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 MSL1Q68DK7 614 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 XKR5Q6UX68 686 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 WFDC8Q8IUA0 241 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 SPACA7Q96KW9 195 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
SNHG1-217ENST00000541578 CCDC9Q9Y3X0 531 aaKnown RBP7.28□□□□□ -1.24
SNHG1-217ENST00000541578 PROCP04070 461 aa7.27□□□□□ -1.25
SNHG1-217ENST00000541578 CHRNA4P43681 627 aa7.27□□□□□ -1.25
SNHG1-217ENST00000541578 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
SNHG1-217ENST00000541578 EGFL7Q9UHF1 273 aa7.27□□□□□ -1.25
SNHG1-217ENST00000541578 POLIQ9UNA4 740 aa7.27□□□□□ -1.25
SNHG1-217ENST00000541578 ICMTO60725 284 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 ELNP15502 786 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 USP5P45974 858 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 GRIK4Q16099 956 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
SNHG1-217ENST00000541578 ILDR2Q71H61 639 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 TMEM63CQ9P1W3 806 aa7.26□□□□□ -1.25
SNHG1-217ENST00000541578 CYP2E1P05181 493 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-217ENST00000541578 GDF6Q6KF10 455 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-217ENST00000541578 NPM2Q86SE8 214 aaKnown RBP7.25□□□□□ -1.25
SNHG1-217ENST00000541578 DTWD1Q8N5C7 304 aa7.25□□□□□ -1.25
SNHG1-217ENST00000541578 IL22RA1Q8N6P7 574 aa7.25□□□□□ -1.25
SNHG1-217ENST00000541578 CNTN3Q9P232 1028 aa7.25□□□□□ -1.25
SNHG1-217ENST00000541578 A6NHS1 94 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 C9orf172C9J069 976 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 FZD6O60353 706 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 CES1P23141 567 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 GATA4P43694 442 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 SERPINB4P48594 390 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 EHHADHQ08426 723 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 NCAPG2Q86XI2 1143 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-217ENST00000541578 CACTIN-AS1Q8N1I8 211 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 PMEPA1Q969W9 287 aa7.24□□□□□ -1.25
SNHG1-217ENST00000541578 H3BRB1 525 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 SMNDC1O75940 238 aaKnown RBP eCLIP7.23□□□□□ -1.253e-14■■■■■ 31.4
SNHG1-217ENST00000541578 KIF4AO95239 1232 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 BAG6P46379 1132 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 FBXO11Q86XK2 927 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 CEP120Q8N960 986 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 C1orf127Q8N9H9 656 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 CCER1Q8TC90 406 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-217ENST00000541578 TUT1Q9H6E5 874 aaKnown RBP7.23□□□□□ -1.25
SNHG1-217ENST00000541578 CCDC87Q9NVE4 849 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 TRIM33Q9UPN9 1127 aa7.23□□□□□ -1.25
SNHG1-217ENST00000541578 SELPP16109 830 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 ATP11AP98196 1134 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-217ENST00000541578 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-217ENST00000541578 MUC3BQ9H195 1237 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 KANSL3Q9P2N6 904 aa7.22□□□□□ -1.25
SNHG1-217ENST00000541578 PBX4Q9BYU1 374 aa7.21□□□□□ -1.26
SNHG1-217ENST00000541578 RASSF4Q9H2L5 321 aa7.21□□□□□ -1.26
SNHG1-217ENST00000541578 SALL4Q9UJQ4 1053 aa7.21□□□□□ -1.26
SNHG1-217ENST00000541578 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.26
SNHG1-217ENST00000541578 PHACTR2O75167 634 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 TNFRSF21O75509 655 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 ECM1Q16610 540 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 GJD3Q8N144 294 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 USP21Q9UK80 565 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 PPME1Q9Y570 386 aa7.2□□□□□ -1.26
SNHG1-217ENST00000541578 DEAF1O75398 565 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-217ENST00000541578 BRD1O95696 1058 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 CDC27P30260 824 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 IGF2-ASQ6U949 168 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 SNX29Q8TEQ0 813 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 LACRTQ9GZZ8 138 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 CHRDQ9H2X0 955 aa7.19□□□□□ -1.26
SNHG1-217ENST00000541578 SRA1Q9HD15 236 aaKnown RBP7.19□□□□□ -1.26
SNHG1-217ENST00000541578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms