RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 KIF4AO95239 1232 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 CHMLP26374 656 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 MYL5Q02045 173 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 ZNF569Q5MCW4 686 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 FAM160A1Q05DH4 1040 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC6Q16204 474 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 MCMDC2Q4G0Z9 681 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 MAP3K2Q9Y2U5 619 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 CEP57Q86XR8 500 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 BAG1Q99933 345 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 CLSTN2Q9H4D0 955 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 ABCF2Q9UG63 623 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 ATP2C2O75185 946 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 USP5P45974 858 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 RANBP6O60518 1105 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 CTNNBL1Q8WYA6 563 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 ZBTB43O43298 467 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 PRPF4BQ13523 1007 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 LMBR1Q8WVP7 490 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 PUS7Q96PZ0 661 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 STARD3NLO95772 234 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 CEP63Q96MT8 703 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
SMARCA4-207ENST00000541122 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC77Q9BR77 488 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 MYO1BO43795 1136 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 TNIP1Q15025 636 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 TSGA10Q9BZW7 698 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 KRT23Q9C075 422 aa17.02■□□□□ 0.32
SMARCA4-207ENST00000541122 DNAJC21Q5F1R6 531 aaKnown RBP17.02■□□□□ 0.31
SMARCA4-207ENST00000541122 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-207ENST00000541122 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-207ENST00000541122 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.31
SMARCA4-207ENST00000541122 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.31
SMARCA4-207ENST00000541122 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 RHOXF2BP0C7M4 288 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 CCDC50Q8IVM0 306 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 RHOXF2Q9BQY4 288 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 TRIM14Q14142 442 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 BCL2L12Q9HB09 334 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 AKR1B15C9JRZ8 316 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 LZTFL1Q9NQ48 299 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 AOX1Q06278 1338 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 NOS1P29475 1434 aa17.01■□□□□ 0.31
SMARCA4-207ENST00000541122 IDEP14735 1019 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 ELF2Q15723 593 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 CFAP58Q5T655 872 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 UBA5Q9GZZ9 404 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 PTPRKQ15262 1439 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 ELP1O95163 1332 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 CCDC42Q96M95 316 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 PHACTR2O75167 634 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 VAMP4O75379 141 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
SMARCA4-207ENST00000541122 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 STAT6P42226 847 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 TNNC1P63316 161 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 AFMP43652 599 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 SPAG5Q96R06 1193 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 NAPGQ99747 312 aaPredicted RBP16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 BICDL2A1A5D9 508 aa16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
SMARCA4-207ENST00000541122 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 HAND2P61296 217 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 WTAPQ15007 396 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 SAMD15Q9P1V8 674 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 GUCA1BQ9UMX6 200 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 INPP5BP32019 993 aa16.98■□□□□ 0.31
SMARCA4-207ENST00000541122 ARHGAP25P42331 645 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms