RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 NKAPLQ5M9Q1 402 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 NUDT8Q8WV74 236 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 UBE2Q2Q8WVN8 375 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 ARMC5Q96C12 935 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 DNAJC2Q99543 621 aaKnown RBP7.62□□□□□ -1.19
PRKDC-209ENST00000540819 C2orf49Q9BVC5 232 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-209ENST00000540819 JPH1Q9HDC5 661 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-209ENST00000540819 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
PRKDC-209ENST00000540819 H3BRB1 525 aa7.61□□□□□ -1.19
PRKDC-209ENST00000540819 C21orf2O43822 256 aa7.61□□□□□ -1.19
PRKDC-209ENST00000540819 ICMTO60725 284 aa7.61□□□□□ -1.19
PRKDC-209ENST00000540819 GLYCTKQ8IVS8 523 aa7.61□□□□□ -1.19
PRKDC-209ENST00000540819 MICAL1Q8TDZ2 1067 aa7.61□□□□□ -1.19
PRKDC-209ENST00000540819 TUT1Q9H6E5 874 aaKnown RBP7.61□□□□□ -1.19
PRKDC-209ENST00000540819 PLEKHD1A6NEE1 506 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 DYRK3O43781 588 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 ABL1P00519 1130 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 ELNP15502 786 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-209ENST00000540819 RAD51AP2Q09MP3 1159 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 NLRP2Q9NX02 1062 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 SLC6A14Q9UN76 642 aa7.6□□□□□ -1.19
PRKDC-209ENST00000540819 SBNO2Q9Y2G9 1366 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 A0A0A0MRY4 1105 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-209ENST00000540819 EPB42P16452 691 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 ATP2B1P20020 1258 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 CCINQ13939 588 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 PCSK7Q16549 785 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 PSAPL1Q6NUJ1 521 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 TINF2Q9BSI4 451 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 GSX2Q9BZM3 304 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 METTL14Q9HCE5 456 aaKnown RBP7.59□□□□□ -1.19
PRKDC-209ENST00000540819 DNAJB12Q9NXW2 375 aaKnown RBP7.59□□□□□ -1.19
PRKDC-209ENST00000540819 PRKAG2Q9UGJ0 569 aa7.59□□□□□ -1.19
PRKDC-209ENST00000540819 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-209ENST00000540819 RAB11FIP3O75154 756 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 DKK1O94907 266 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 SCNN1AP37088 669 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 ITGAEP38570 1179 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 RTN1Q16799 776 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 IER5Q5VY09 327 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 C9orf131Q5VYM1 1079 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 EGFLAMQ63HQ2 1017 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
PRKDC-209ENST00000540819 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRKDC-209ENST00000540819 ADGRE1Q14246 886 aa7.57□□□□□ -1.2
PRKDC-209ENST00000540819 SDE2Q6IQ49 451 aa7.57□□□□□ -1.2
PRKDC-209ENST00000540819 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
PRKDC-209ENST00000540819 LENG1Q96BZ8 264 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-209ENST00000540819 USP21Q9UK80 565 aa7.57□□□□□ -1.2
PRKDC-209ENST00000540819 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
PRKDC-209ENST00000540819 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 SELPP16109 830 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 NFKB1P19838 968 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
PRKDC-209ENST00000540819 DPYDQ12882 1025 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 ZNF211Q13398 564 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-209ENST00000540819 CCDC144BQ3MJ40 725 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 DMRTC2Q8IXT2 367 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-209ENST00000540819 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
PRKDC-209ENST00000540819 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 H2AFB2P0C5Z0 115 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 IGFBP4P22692 258 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 IGBP1P78318 339 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
PRKDC-209ENST00000540819 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
PRKDC-209ENST00000540819 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 ZFP64Q9NPA5 681 aa7.55□□□□□ -1.2
PRKDC-209ENST00000540819 METTL5Q9NRN9 209 aaKnown RBP7.55□□□□□ -1.2
PRKDC-209ENST00000540819 CXXC1Q9P0U4 656 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-209ENST00000540819 LOC102724159A0A0B4J2E5 919 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 LGR5O75473 907 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 GTF2F1P35269 517 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRKDC-209ENST00000540819 FGD1P98174 961 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
PRKDC-209ENST00000540819 PWP2Q15269 919 aaKnown RBP7.54□□□□□ -1.2
PRKDC-209ENST00000540819 LDLRAD1Q5T700 205 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 CCDC181Q5TID7 509 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 TP53INP1Q96A56 240 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 PSMG3-AS1Q96PY0 264 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 CCSER2Q9H7U1 834 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 TBX22Q9Y458 520 aa7.54□□□□□ -1.2
PRKDC-209ENST00000540819 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 CPB1P15086 417 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
PRKDC-209ENST00000540819 ECM1Q16610 540 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 PTPROQ16827 1216 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
PRKDC-209ENST00000540819 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms