RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 KIF20BQ96Q89 1820 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 MARCKSP29966 332 aaPredicted RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 ORC3Q9UBD5 711 aaPredicted RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 TDO2P48775 406 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 SLC9C2Q5TAH2 1124 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 LRP2BPQ9P2M1 347 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 PTPDC1A2A3K4 754 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 CCAR2Q8N163 923 aaKnown RBP11.6□□□□□ -0.55
PHC1-208ENST00000540574 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
PHC1-208ENST00000540574 DLC1Q96QB1 1528 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 SNAP23O00161 211 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
PHC1-208ENST00000540574 HOMER1Q86YM7 354 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 PRDM10Q9NQV6 1147 aa11.6□□□□□ -0.55
PHC1-208ENST00000540574 TPM2P07951 284 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 IL2RBP14784 551 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
PHC1-208ENST00000540574 TYRO3Q06418 890 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 ATP2B3Q16720 1220 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
PHC1-208ENST00000540574 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
PHC1-208ENST00000540574 JAG2Q9Y219 1238 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 CYP21A2P08686 494 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
PHC1-208ENST00000540574 ADORA1P30542 326 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
PHC1-208ENST00000540574 CCDC24Q8N4L8 307 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 PDILTQ8N807 584 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 AOX1Q06278 1338 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 DIP2BQ9P265 1576 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 ERICH2A1L162 156 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 PTGS1P23219 599 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
PHC1-208ENST00000540574 TPM4P67936 248 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 MYL10Q9BUA6 226 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
PHC1-208ENST00000540574 TMEM94Q12767 1356 aa11.58□□□□□ -0.55
PHC1-208ENST00000540574 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 RAD21O60216 631 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 TAF5LO75529 589 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 MAP4K1Q92918 833 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 RIMS1Q86UR5 1692 aaKnown RBP11.58□□□□□ -0.56
PHC1-208ENST00000540574 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
PHC1-208ENST00000540574 EYA2O00167 538 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 ZAP70P43403 619 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 MIGA1Q8NAN2 632 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 GJB4Q9NTQ9 266 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 CLIP2Q9UDT6 1046 aa11.58□□□□□ -0.56
PHC1-208ENST00000540574 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
PHC1-208ENST00000540574 KBTBD3Q8NAB2 608 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 NAPBQ9H115 298 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 PRC1O43663 620 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 NR1I2O75469 434 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
PHC1-208ENST00000540574 XAGE2Q96GT9 111 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
PHC1-208ENST00000540574 DHX16O60231 1041 aaKnown RBP11.57□□□□□ -0.56
PHC1-208ENST00000540574 NRKQ7Z2Y5 1582 aa11.57□□□□□ -0.56
PHC1-208ENST00000540574 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
PHC1-208ENST00000540574 PPP1R9BQ96SB3 815 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 TMX1Q9H3N1 280 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 A0A0G2JLW4 131 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 EXOC5O00471 708 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 RNF113AO15541 343 aaKnown RBP11.56□□□□□ -0.56
PHC1-208ENST00000540574 KCNQ4P56696 695 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
PHC1-208ENST00000540574 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 IFIT3O14879 490 aaKnown RBP11.56□□□□□ -0.56
PHC1-208ENST00000540574 OFD1O75665 1012 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 ATP5JP18859 108 aa11.56□□□□□ -0.56
PHC1-208ENST00000540574 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
PHC1-208ENST00000540574 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.55□□□□□ -0.56
PHC1-208ENST00000540574 V9GYY5 206 aaPredicted RBP11.55□□□□□ -0.56
PHC1-208ENST00000540574 IRS4O14654 1257 aaPredicted RBP11.55□□□□□ -0.56
PHC1-208ENST00000540574 ITGA6P23229 1130 aa11.55□□□□□ -0.56
PHC1-208ENST00000540574 SERPINC1P01008 464 aa11.55□□□□□ -0.56
PHC1-208ENST00000540574 PHKBQ93100 1093 aa11.55□□□□□ -0.56
PHC1-208ENST00000540574 TTC14Q96N46 770 aa11.55□□□□□ -0.56
PHC1-208ENST00000540574 B4E1Z4 1266 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 LRMPQ12912 555 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
PHC1-208ENST00000540574 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms