RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 IMPACTQ9P2X3 320 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 MYO5BQ9ULV0 1848 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 A0A1B0GVL5 298 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 LMAN1P49257 510 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 AK7Q96M32 723 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 KIF13AQ9H1H9 1805 aa14.94□□□□□ -0.02
SFSWAP-209ENST00000540469 EVCP57679 992 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 ETF1P62495 437 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 NUTM2GQ5VZR2 741 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 L2HGDHQ9H9P8 463 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 HMG20BQ9P0W2 317 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 FEZ2Q9UHY8 353 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 ERBB3P21860 1342 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 STK38Q15208 465 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 RASSF4Q9H2L5 321 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 PSDA5PKW4 1024 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 SERPINC1P01008 464 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 FAM53CQ9NYF3 392 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 ORC3Q9UBD5 711 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 RSPH14Q9UHP6 348 aa14.93□□□□□ -0.02
SFSWAP-209ENST00000540469 ST5P78524 1137 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 C14orf37Q86TY3 774 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 DIP2CQ9Y2E4 1556 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 TULP2O00295 520 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 ZSCAN26Q16670 478 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 ZNF589Q86UQ0 364 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 MRPS27Q92552 414 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 KCNB2Q92953 911 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 TPM1P09493 284 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 DPCR1Q3MIW9 517 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 CFAP100Q494V2 611 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 IL17REQ8NFR9 667 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 SMARCE1Q969G3 411 aa14.92□□□□□ -0.02
SFSWAP-209ENST00000540469 TEFQ10587 303 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 SECISBP2LQ93073 1101 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 EDC3Q96F86 508 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 PRR36Q9H6K5 1346 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 SMC1AQ14683 1233 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 BEND3Q5T5X7 828 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 ARFGAP3Q9NP61 516 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 SLC20A2Q08357 652 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 PDILTQ8N807 584 aa14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 RBM33Q96EV2 1170 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-209ENST00000540469 DLC1Q96QB1 1528 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 SLC3A2P08195 630 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 EAF2Q96CJ1 260 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 SRRTQ9BXP5 876 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 RCOR1Q9UKL0 485 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 TUBB4AP04350 444 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 GYS2P54840 703 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 TLR7Q9NYK1 1049 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
SFSWAP-209ENST00000540469 GNG11P61952 73 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 SCRN1Q12765 414 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 DHX8Q14562 1220 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 ZSWIM4Q9H7M6 989 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 CWF19L2Q2TBE0 894 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 CCDC129Q6ZRS4 1044 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 LEKR1Q6ZMV7 388 aa14.89□□□□□ -0.03
SFSWAP-209ENST00000540469 FLT4P35916 1363 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 CASQ1P31415 396 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 APOBRQ0VD83 1088 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 GOLGA6L1Q8N7Z2 621 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 SLC26A8Q96RN1 970 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 NCOA5Q9HCD5 579 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 ZSCAN12O43309 604 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 UBASH3AP57075 661 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 PTPN21Q16825 1174 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 NDUFB9Q9Y6M9 179 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 EFCAB8A8MWE9 144 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 FANCCQ00597 558 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 GOLGA8FQ08AF8 430 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 GOLGA8DPQ0D2H9 430 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
SFSWAP-209ENST00000540469 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 NLRP6P59044 892 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 SEC62Q99442 399 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 METP08581 1390 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 TMEM131LA2VDJ0 1609 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 TRIM66O15016 1216 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 NDUFA8P51970 172 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 CCDC93Q567U6 631 aa14.87□□□□□ -0.03
SFSWAP-209ENST00000540469 CCDC158Q5M9N0 1113 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms