RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 SPTLC3Q9NUV7 552 aa14.7□□□□□ -0.06
NEK6-213ENST00000540326 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
NEK6-213ENST00000540326 C1orf167Q5SNV9 1468 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
NEK6-213ENST00000540326 SCRN1Q12765 414 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 KIAA1524Q8TCG1 905 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 DCAF5Q96JK2 942 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 GOLIM4O00461 696 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 TIMM10P62072 90 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 ZMYND15Q9H091 742 aa14.69□□□□□ -0.06
NEK6-213ENST00000540326 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 CASP7P55210 303 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 CABP4P57796 275 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 RESTQ13127 1097 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 DDX19AQ9NUU7 478 aaKnown RBP14.68□□□□□ -0.06
NEK6-213ENST00000540326 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 A0A0G2JLW4 131 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 PTGS1P23219 599 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 KBTBD3Q8NAB2 608 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 PRIMPOLQ96LW4 560 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
NEK6-213ENST00000540326 ZNF142P52746 1687 aaPredicted RBP14.67□□□□□ -0.06
NEK6-213ENST00000540326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.67□□□□□ -0.06
NEK6-213ENST00000540326 GOLGA6L6A8MZA4 724 aa14.67□□□□□ -0.06
NEK6-213ENST00000540326 PLBD2Q8NHP8 589 aa14.67□□□□□ -0.06
NEK6-213ENST00000540326 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
NEK6-213ENST00000540326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.064e-6■■□□□ 11.9
NEK6-213ENST00000540326 APOBRQ0VD83 1088 aa14.67□□□□□ -0.06
NEK6-213ENST00000540326 FTOQ9C0B1 505 aaKnown RBP eCLIP14.67□□□□□ -0.06
NEK6-213ENST00000540326 DNAJC25Q9H1X3 360 aa14.67□□□□□ -0.06
NEK6-213ENST00000540326 NAP1L2Q9ULW6 460 aaPredicted RBP14.67□□□□□ -0.06
NEK6-213ENST00000540326 CCT2P78371 535 aaKnown RBP14.66□□□□□ -0.06
NEK6-213ENST00000540326 HMGN5P82970 282 aaKnown RBP14.66□□□□□ -0.06
NEK6-213ENST00000540326 PAG1Q9NWQ8 432 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 NBPF26B4DH59 902 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 FOXO4P98177 505 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 NBPF14Q5TI25 921 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 NBPF10Q6P3W6 841 aaKnown RBP14.66□□□□□ -0.06
NEK6-213ENST00000540326 RBM43Q6ZSC3 357 aaKnown RBP14.66□□□□□ -0.06
NEK6-213ENST00000540326 CHST3Q7LGC8 479 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 ATG9AQ7Z3C6 839 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 DRC7Q8IY82 874 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 NBPF15Q8N660 670 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 TRIM5Q9C035 493 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 NRBP1Q9UHY1 535 aa14.66□□□□□ -0.06
NEK6-213ENST00000540326 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 ZNF165P49910 485 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 TTLL7Q6ZT98 887 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
NEK6-213ENST00000540326 CCDC186Q7Z3E2 898 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 ZNF594Q96JF6 807 aaPredicted RBP14.65□□□□□ -0.06
NEK6-213ENST00000540326 NCOA5Q9HCD5 579 aaKnown RBP14.65□□□□□ -0.06
NEK6-213ENST00000540326 TPM3P06753 285 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 LRMPQ12912 555 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 RFX7Q2KHR2 1363 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 NSUN7Q8NE18 718 aaKnown RBP14.65□□□□□ -0.06
NEK6-213ENST00000540326 SH3TC1Q8TE82 1336 aa14.65□□□□□ -0.06
NEK6-213ENST00000540326 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
NEK6-213ENST00000540326 PFKFB2O60825 505 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 LRRC24Q50LG9 513 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 SMARCC2Q8TAQ2 1214 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 CFAP45Q9UL16 551 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 ALS2Q96Q42 1657 aa14.64□□□□□ -0.07
NEK6-213ENST00000540326 PTPDC1A2A3K4 754 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 H7C1W4 665 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 GUCY1B3Q02153 619 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 ZBTB3Q9H5J0 574 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 A1BGP04217 495 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
NEK6-213ENST00000540326 HSPD1P10809 573 aaKnown RBP14.63□□□□□ -0.07
NEK6-213ENST00000540326 ATF3P18847 181 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 ADD1P35611 737 aaKnown RBP14.63□□□□□ -0.07
NEK6-213ENST00000540326 MTERF4Q7Z6M4 381 aaKnown RBP14.63□□□□□ -0.07
NEK6-213ENST00000540326 ZNF710Q8N1W2 664 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
NEK6-213ENST00000540326 E7EWF7 191 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.074e-7■■■□□ 17.4
NEK6-213ENST00000540326 HELLSQ9NRZ9 838 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 CWC25Q9NXE8 425 aaPredicted RBP14.62□□□□□ -0.07
NEK6-213ENST00000540326 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 LAMA4Q16363 1823 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
NEK6-213ENST00000540326 ZNF75DP51815 510 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 TDRD7Q8NHU6 1098 aaKnown RBP14.62□□□□□ -0.07
NEK6-213ENST00000540326 LLPHQ9BRT6 129 aaKnown RBP14.62□□□□□ -0.07
NEK6-213ENST00000540326 KIF1AQ12756 1690 aa14.62□□□□□ -0.07
NEK6-213ENST00000540326 A0A087WWV3 80 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 EXOSC10Q01780 885 aaKnown RBP14.61□□□□□ -0.07
NEK6-213ENST00000540326 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
NEK6-213ENST00000540326 USP28Q96RU2 1077 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 PUS3Q9BZE2 481 aaKnown RBP14.61□□□□□ -0.07
NEK6-213ENST00000540326 MAST3O60307 1309 aa14.61□□□□□ -0.07
NEK6-213ENST00000540326 A0A1B0GUL7 405 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms