RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 UPP2O95045 317 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
C16orf62-212ENST00000540240 FLAD1Q8NFF5 587 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 CCNL1Q9UK58 526 aaPredicted RBP10.74□□□□□ -0.69
C16orf62-212ENST00000540240 MAP4K5Q9Y4K4 846 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 MAP3K19Q56UN5 1328 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 TONSLQ96HA7 1378 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 USP47Q96K76 1375 aa10.74□□□□□ -0.69
C16orf62-212ENST00000540240 KAT6BQ8WYB5 2073 aa10.73□□□□□ -0.69
C16orf62-212ENST00000540240 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
C16orf62-212ENST00000540240 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
C16orf62-212ENST00000540240 RAPGEF4Q8WZA2 1011 aa10.73□□□□□ -0.69
C16orf62-212ENST00000540240 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
C16orf62-212ENST00000540240 RTL1A6NKG5 1358 aa10.73□□□□□ -0.69
C16orf62-212ENST00000540240 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
C16orf62-212ENST00000540240 LY75O60449 1722 aa10.72□□□□□ -0.69
C16orf62-212ENST00000540240 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 NSD2O96028 1365 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 KCNQ4P56696 695 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 CTDSPL2Q05D32 466 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 ERFEQ4G0M1 354 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
C16orf62-212ENST00000540240 COL23A1Q86Y22 540 aaPredicted RBP10.71□□□□□ -0.69
C16orf62-212ENST00000540240 CCDC116Q8IYX3 515 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
C16orf62-212ENST00000540240 TESK2Q96S53 571 aa10.71□□□□□ -0.69
C16orf62-212ENST00000540240 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 CBLBQ13191 982 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 NBPF6Q5VWK0 638 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 NLGN2Q8NFZ4 835 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 NBPF4Q96M43 638 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
C16orf62-212ENST00000540240 KIF24Q5T7B8 1368 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 PCDH11XQ9BZA7 1347 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 PCDH11YQ9BZA8 1340 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 FYB1O15117 783 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 TMF1P82094 1093 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
C16orf62-212ENST00000540240 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
C16orf62-212ENST00000540240 TSEN34Q9BSV6 310 aaKnown RBP10.69□□□□□ -0.7
C16orf62-212ENST00000540240 MEGF6O75095 1541 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 FBLN1P23142 703 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 KRT76Q01546 638 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
C16orf62-212ENST00000540240 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
C16orf62-212ENST00000540240 INSRP06213 1382 aa10.67□□□□□ -0.7
C16orf62-212ENST00000540240 YBX3P16989 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
C16orf62-212ENST00000540240 RRS1Q15050 365 aaKnown RBP10.67□□□□□ -0.7
C16orf62-212ENST00000540240 SHANK3Q9BYB0 1731 aa10.67□□□□□ -0.7
C16orf62-212ENST00000540240 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
C16orf62-212ENST00000540240 TTLL8A6PVC2 850 aa10.66□□□□□ -0.7
C16orf62-212ENST00000540240 PTSQ03393 145 aa10.66□□□□□ -0.7
C16orf62-212ENST00000540240 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
C16orf62-212ENST00000540240 GGNBP2Q9H3C7 697 aa10.66□□□□□ -0.7
C16orf62-212ENST00000540240 RGPD2P0DJD1 1756 aa10.66□□□□□ -0.7
C16orf62-212ENST00000540240 FLT4P35916 1363 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 PALLDQ8WX93 1383 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 HSP90AB2PQ58FF8 381 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 USHBP1Q8N6Y0 703 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
C16orf62-212ENST00000540240 C5P01031 1676 aa10.64□□□□□ -0.71
C16orf62-212ENST00000540240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.64□□□□□ -0.71
C16orf62-212ENST00000540240 Q6ZVU0 165 aa10.64□□□□□ -0.71
C16orf62-212ENST00000540240 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
C16orf62-212ENST00000540240 GPBP1L1Q9HC44 474 aaPredicted RBP10.64□□□□□ -0.71
C16orf62-212ENST00000540240 CYP27B1O15528 508 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 SSFA2P28290 1259 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 GSK3AP49840 483 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 CNTNAP3BQ96NU0 1288 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 ARHGAP9Q9BRR9 750 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 CNTNAP3Q9BZ76 1288 aa10.63□□□□□ -0.71
C16orf62-212ENST00000540240 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 NR6A1Q15406 480 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 PDXDC2PQ6P474 469 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 KCTD15Q96SI1 283 aaPredicted RBP10.62□□□□□ -0.71
C16orf62-212ENST00000540240 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
C16orf62-212ENST00000540240 C4BP0C0L5 1744 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 TAF1LQ8IZX4 1826 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 SPINT1O43278 529 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 PIGBQ92521 554 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
C16orf62-212ENST00000540240 LOC102724428A0A0B4J2F2 783 aa10.6□□□□□ -0.71
C16orf62-212ENST00000540240 SIK1P57059 783 aa10.6□□□□□ -0.71
C16orf62-212ENST00000540240 PROCA1Q8NCQ7 364 aaPredicted RBP10.6□□□□□ -0.71
C16orf62-212ENST00000540240 WASHC2AQ641Q2 1341 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 KIF20BQ96Q89 1820 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 PPM1GO15355 546 aaPredicted RBP10.59□□□□□ -0.71
C16orf62-212ENST00000540240 HSPA6P17066 643 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 IFNL2Q8IZJ0 200 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
C16orf62-212ENST00000540240 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms