RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.9
LTBR-207ENST00000539925 DDIT3P35638 169 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 IGHMBP2P38935 993 aaKnown RBP20.64■□□□□ 0.9
LTBR-207ENST00000539925 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.9
LTBR-207ENST00000539925 MAP4K1Q92918 833 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.9
LTBR-207ENST00000539925 MPHOSPH8Q99549 860 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 HMG20BQ9P0W2 317 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 SBF2Q86WG5 1849 aa20.64■□□□□ 0.89
LTBR-207ENST00000539925 GNPATO15228 680 aa20.64■□□□□ 0.89
LTBR-207ENST00000539925 CD2BP2O95400 341 aaKnown RBP20.64■□□□□ 0.89
LTBR-207ENST00000539925 PUM3Q15397 648 aaKnown RBP20.64■□□□□ 0.89
LTBR-207ENST00000539925 SLC10A5Q5PT55 438 aa20.64■□□□□ 0.89
LTBR-207ENST00000539925 UQCRFS1P1P0C7P4 283 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 HCLS1P14317 486 aaPredicted RBP20.63■□□□□ 0.89
LTBR-207ENST00000539925 SF3B3Q15393 1217 aaKnown RBP20.63■□□□□ 0.89
LTBR-207ENST00000539925 MCMDC2Q4G0Z9 681 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 KRT27Q7Z3Y8 459 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 LPIN2Q92539 896 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 FAM227BQ96M60 508 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 PALD1Q9ULE6 856 aa20.63■□□□□ 0.89
LTBR-207ENST00000539925 KCNJ4P48050 445 aa20.62■□□□□ 0.89
LTBR-207ENST00000539925 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
LTBR-207ENST00000539925 SNX14Q9Y5W7 946 aa20.62■□□□□ 0.89
LTBR-207ENST00000539925 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 PSMA5P28066 241 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 SSFA2P28290 1259 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 GOLIM4O00461 696 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 SLC5A1P13866 664 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 NECTIN1Q15223 517 aa20.61■□□□□ 0.89
LTBR-207ENST00000539925 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
LTBR-207ENST00000539925 U3KPZ7 1027 aaPredicted RBP20.61■□□□□ 0.89
LTBR-207ENST00000539925 GTF2E1P29083 439 aaPredicted RBP20.6■□□□□ 0.89
LTBR-207ENST00000539925 KRT32Q14532 448 aa20.6■□□□□ 0.89
LTBR-207ENST00000539925 TRAPPC3LQ5T215 181 aa20.6■□□□□ 0.89
LTBR-207ENST00000539925 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
LTBR-207ENST00000539925 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
LTBR-207ENST00000539925 RBM8AQ9Y5S9 174 aaKnown RBP20.6■□□□□ 0.89
LTBR-207ENST00000539925 RBM6P78332 1123 aaKnown RBP20.59■□□□□ 0.89
LTBR-207ENST00000539925 PTH1RQ03431 593 aa20.59■□□□□ 0.89
LTBR-207ENST00000539925 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
LTBR-207ENST00000539925 USPL1Q5W0Q7 1092 aa20.59■□□□□ 0.89
LTBR-207ENST00000539925 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
LTBR-207ENST00000539925 TPTE2Q6XPS3 522 aa20.59■□□□□ 0.89
LTBR-207ENST00000539925 INTS4Q96HW7 963 aaKnown RBP20.59■□□□□ 0.89
LTBR-207ENST00000539925 FAM177BA6PVY3 158 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 RNF113AO15541 343 aaKnown RBP20.58■□□□□ 0.89
LTBR-207ENST00000539925 TAF5LO75529 589 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 FGFR2P21802 821 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 RFC4P35249 363 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 NUCB2P80303 420 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.891e-6■■■□□ 15.4
LTBR-207ENST00000539925 BCL2L12Q9HB09 334 aa20.58■□□□□ 0.89
LTBR-207ENST00000539925 DDX60Q8IY21 1712 aaKnown RBP20.58■□□□□ 0.89
LTBR-207ENST00000539925 ZMYM1Q5SVZ6 1142 aa20.58■□□□□ 0.88
LTBR-207ENST00000539925 FAM182BQ5T319 152 aa20.58■□□□□ 0.88
LTBR-207ENST00000539925 TAF1LQ8IZX4 1826 aa20.58■□□□□ 0.88
LTBR-207ENST00000539925 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.88
LTBR-207ENST00000539925 C4BP0C0L5 1744 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
LTBR-207ENST00000539925 ANKRD18AQ8IVF6 992 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
LTBR-207ENST00000539925 DSCC1Q9BVC3 393 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 CYP46A1Q9Y6A2 500 aa20.57■□□□□ 0.88
LTBR-207ENST00000539925 PTMSP20962 102 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
LTBR-207ENST00000539925 ADORA1P30542 326 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 CUL4AQ13619 759 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 ERFEQ4G0M1 354 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 VPS53Q5VIR6 699 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 NBPF5PQ86XG9 351 aaPredicted RBP20.56■□□□□ 0.88
LTBR-207ENST00000539925 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
LTBR-207ENST00000539925 KCNQ4P56696 695 aa20.55■□□□□ 0.88
LTBR-207ENST00000539925 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
LTBR-207ENST00000539925 NLRP3Q96P20 1036 aa20.55■□□□□ 0.88
LTBR-207ENST00000539925 ZSWIM6Q9HCJ5 1215 aa20.55■□□□□ 0.88
LTBR-207ENST00000539925 COL24A1Q17RW2 1714 aa20.55■□□□□ 0.88
LTBR-207ENST00000539925 RAB3GAP1Q15042 981 aa20.54■□□□□ 0.88
LTBR-207ENST00000539925 RASEFQ8IZ41 740 aa20.54■□□□□ 0.88
LTBR-207ENST00000539925 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
LTBR-207ENST00000539925 SLC27A2O14975 620 aa20.54■□□□□ 0.88
LTBR-207ENST00000539925 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
LTBR-207ENST00000539925 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
LTBR-207ENST00000539925 TTC14Q96N46 770 aa20.54■□□□□ 0.88
LTBR-207ENST00000539925 GBP4Q96PP9 640 aa20.54■□□□□ 0.88
LTBR-207ENST00000539925 UPF3BQ9BZI7 483 aaKnown RBP20.54■□□□□ 0.88
LTBR-207ENST00000539925 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
LTBR-207ENST00000539925 ANKRD1Q15327 319 aa20.53■□□□□ 0.88
LTBR-207ENST00000539925 CCDC102BQ68D86 513 aa20.53■□□□□ 0.88
LTBR-207ENST00000539925 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
LTBR-207ENST00000539925 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
LTBR-207ENST00000539925 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
LTBR-207ENST00000539925 RUFY3Q7L099 469 aa20.52■□□□□ 0.88
LTBR-207ENST00000539925 ALDH8A1Q9H2A2 487 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms