RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CABP4P57796 275 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 UBE2HP62256 183 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 PDE4CQ08493 712 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 RPS6KB1P23443 525 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 CDC37L1Q7L3B6 337 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 ZNF609O15014 1411 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 ARFGEF2Q9Y6D5 1785 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 FOXO4P98177 505 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 CCDC186Q7Z3E2 898 aa14.9□□□□□ -0.02
SFSWAP-208ENST00000539506 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 LMBR1LQ6UX01 489 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 SPATA31A3Q5VYP0 1347 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
SFSWAP-208ENST00000539506 BLOC1S2Q6QNY1 142 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 PLBD2Q8NHP8 589 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 DNAJC2Q99543 621 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 KCNA4P22459 653 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 TSGA10IPQ3SY00 556 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 DDX46Q7L014 1031 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 ATG9AQ7Z3C6 839 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 ABCC6O95255 1503 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 LARP1BQ659C4 914 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 KIAA1524Q8TCG1 905 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 FUCA2Q9BTY2 467 aa14.88□□□□□ -0.03
SFSWAP-208ENST00000539506 A1BGP04217 495 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 PSMA5P28066 241 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 ARID5BQ14865 1188 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 ERCC4Q92889 916 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 H7C1W4 665 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 PRIMPOLQ96LW4 560 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 HAUS7Q99871 368 aa14.87□□□□□ -0.03
SFSWAP-208ENST00000539506 DMTNQ08495 405 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 TRIM5Q9C035 493 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 ALDH8A1Q9H2A2 487 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 A0A0G2JLW4 131 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 CYP21A2P08686 494 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 TIMM10P62072 90 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 CHAF1AQ13111 956 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 DACT1Q9NYF0 836 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 UVSSAQ2YD98 709 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
SFSWAP-208ENST00000539506 CPDO75976 1380 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 GOLGA6L4A6NEF3 574 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 JAK2O60674 1132 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 STOX1Q6ZVD7 989 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 LRRC24Q50LG9 513 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 DCCP43146 1447 aa14.85□□□□□ -0.03
SFSWAP-208ENST00000539506 LRRC2Q9BYS8 371 aa14.84□□□□□ -0.03
SFSWAP-208ENST00000539506 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-208ENST00000539506 CADPS2Q86UW7 1296 aa14.84□□□□□ -0.03
SFSWAP-208ENST00000539506 ZBTB3Q9H5J0 574 aa14.84□□□□□ -0.03
SFSWAP-208ENST00000539506 HMG20BQ9P0W2 317 aa14.84□□□□□ -0.03
SFSWAP-208ENST00000539506 CCDC192P0DO97 292 aa14.83□□□□□ -0.03
SFSWAP-208ENST00000539506 DNAJC25Q9H1X3 360 aa14.83□□□□□ -0.03
SFSWAP-208ENST00000539506 TYRO3Q06418 890 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 NEK1Q96PY6 1258 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 TRMT1Q9NXH9 659 aaKnown RBP14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 HSPA2P54652 639 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 MCMDC2Q4G0Z9 681 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 Q6ZUG5 572 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 BRINP3Q76B58 766 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 NEUROD6Q96NK8 337 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 MRVI1Q9Y6F6 885 aa14.83□□□□□ -0.04
SFSWAP-208ENST00000539506 LAMB4A4D0S4 1761 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 GOLIM4O00461 696 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 ZBTB22O15209 634 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 ANKRD1Q15327 319 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 KBTBD3Q8NAB2 608 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 ZBTB9Q96C00 473 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 SPTLC3Q9NUV7 552 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 TJP1Q07157 1748 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 TNMDQ9H2S6 317 aa14.82□□□□□ -0.04
SFSWAP-208ENST00000539506 TNNT1P13805 278 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 BICD2Q8TD16 824 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 GTF3C6Q969F1 213 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 WDR17Q8IZU2 1322 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 TOM1L2Q6ZVM7 507 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 ZNF771Q7L3S4 317 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 CWC25Q9NXE8 425 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 NUP188Q5SRE5 1749 aa14.81□□□□□ -0.04
SFSWAP-208ENST00000539506 NR1I2O75469 434 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms