RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CIAO1O76071 339 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 COL4A1P02462 1669 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 USPL1Q5W0Q7 1092 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-205ENST00000538545 BTAF1O14981 1849 aa17.03■□□□□ 0.32
ACTN1-205ENST00000538545 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.32
ACTN1-205ENST00000538545 NTSR2O95665 410 aa17.02■□□□□ 0.32
ACTN1-205ENST00000538545 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
ACTN1-205ENST00000538545 NECTIN1Q15223 517 aa17.02■□□□□ 0.31
ACTN1-205ENST00000538545 ATP2B3Q16720 1220 aa17.02■□□□□ 0.31
ACTN1-205ENST00000538545 ERFEQ4G0M1 354 aa17.02■□□□□ 0.31
ACTN1-205ENST00000538545 QTRT2Q9H974 415 aaKnown RBP17.02■□□□□ 0.31
ACTN1-205ENST00000538545 ZAP70P43403 619 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 ANAPC15P60006 121 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 BCL2L12Q9HB09 334 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 LARGE1O95461 756 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 MCM4P33991 863 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 AK2P54819 239 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 MAP4K1Q92918 833 aa17.01■□□□□ 0.31
ACTN1-205ENST00000538545 COL5A3P25940 1745 aaPredicted RBP17■□□□□ 0.31
ACTN1-205ENST00000538545 MED23Q9ULK4 1368 aa17■□□□□ 0.31
ACTN1-205ENST00000538545 GPR108Q9NPR9 543 aa17■□□□□ 0.31
ACTN1-205ENST00000538545 SLC27A2O14975 620 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 VGLL2Q8N8G2 317 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-205ENST00000538545 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 MCAMP43121 646 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 PHKA1P46020 1223 aa16.99■□□□□ 0.31
ACTN1-205ENST00000538545 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-205ENST00000538545 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
ACTN1-205ENST00000538545 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-205ENST00000538545 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
ACTN1-205ENST00000538545 MYO5AQ9Y4I1 1855 aaKnown RBP16.98■□□□□ 0.31
ACTN1-205ENST00000538545 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
ACTN1-205ENST00000538545 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 HIP1O00291 1037 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 PDE8BO95263 885 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 TTC14Q96N46 770 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-205ENST00000538545 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 TRPC5Q9UL62 973 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-205ENST00000538545 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-205ENST00000538545 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
ACTN1-205ENST00000538545 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
ACTN1-205ENST00000538545 M0R2C6 588 aa16.96■□□□□ 0.31
ACTN1-205ENST00000538545 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
ACTN1-205ENST00000538545 OSBP2Q969R2 916 aa16.96■□□□□ 0.31
ACTN1-205ENST00000538545 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
ACTN1-205ENST00000538545 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.3
ACTN1-205ENST00000538545 TRIM37O94972 964 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 RREB1Q92766 1687 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 MAST3O60307 1309 aa16.95■□□□□ 0.3
ACTN1-205ENST00000538545 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 CYP21A2P08686 494 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-205ENST00000538545 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
ACTN1-205ENST00000538545 SBF2Q86WG5 1849 aa16.94■□□□□ 0.3
ACTN1-205ENST00000538545 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-205ENST00000538545 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
ACTN1-205ENST00000538545 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 ZPR1O75312 459 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 BCAMP50895 628 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
ACTN1-205ENST00000538545 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-205ENST00000538545 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
ACTN1-205ENST00000538545 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
ACTN1-205ENST00000538545 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 RNF113AO15541 343 aaKnown RBP16.92■□□□□ 0.3
ACTN1-205ENST00000538545 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
ACTN1-205ENST00000538545 GSE1Q14687 1217 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 ATRNO75882 1429 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 HAND2P61296 217 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 CHRNDQ07001 517 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 CUL4AQ13619 759 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 STOX1Q6ZVD7 989 aa16.92■□□□□ 0.3
ACTN1-205ENST00000538545 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms