RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	CEBPA	P49715	358 aa	Predicted RBP	7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	RNF144A	P50876	292 aa	Predicted RBP	7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CC2D1B	Q5T0F9	858 aa	Known RBP	7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	C6orf118	Q5T5N4	469 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	FAM9B	Q8IZU0	186 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PRIMPOL	Q96LW4	560 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	NLRP3	Q96P20	1036 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	HINFP	Q9BQA5	517 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	POGK	Q9P215	609 aa		7.36	□□□□□ -1.23
NPIPB3-208	ENST00000537983	BLM	P54132	1417 aa	Predicted RBP	7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CDK2AP1	O14519	115 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PRMT3	O60678	531 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	BRD1	O95696	1058 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CTSO	P43234	321 aa	Predicted RBP	7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	SLC9A9	Q8IVB4	645 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	THEMIS	Q8N1K5	641 aa	Predicted RBP	7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	C1orf216	Q8TAB5	229 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PNISR	Q8TF01	805 aa	Known RBP	7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	GRIP2	Q9C0E4	1043 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	STK26	Q9P289	416 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	KIF20B	Q96Q89	1820 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983	TOPAZ1	Q8N9V7	1692 aa		7.35	□□□□□ -1.23
NPIPB3-208	ENST00000537983		A0A1W2PP64	1363 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PIK3R4	Q99570	1358 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CDC42BPG	Q6DT37	1551 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CGNL1	Q0VF96	1302 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	SCARF1	Q14162	830 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	B4GALNT3	Q6L9W6	998 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PURB	Q96QR8	312 aa	Known RBP	7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	POLM	Q9NP87	494 aa	Predicted RBP	7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	ATP13A2	Q9NQ11	1180 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	CD163L1	Q9NR16	1453 aa		7.34	□□□□□ -1.23
NPIPB3-208	ENST00000537983	PLEKHH1	Q9ULM0	1364 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SETD1B	Q9UPS6	1966 aa	Known RBP	7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	LCE2B	O14633	110 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	LTK	P29376	864 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	PPP2R1A	P30153	589 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	CNGB1	Q14028	1251 aa	Predicted RBP	7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	POTEA	Q6S8J7	498 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TAS1R3	Q7RTX0	852 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TXNDC2	Q86VQ3	553 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NBPF15	Q8N660	670 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	GAS2L2	Q8NHY3	880 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	RNF217	Q8TC41	542 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SCG3	Q8WXD2	468 aa	Known RBP	7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ZFP42	Q96MM3	310 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	DACH1	Q9UI36	760 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ROBO2	Q9HCK4	1378 aa		7.33	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ITSN1	Q15811	1721 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	MON2	Q7Z3U7	1717 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SOS2	Q07890	1332 aa	Predicted RBP	7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SPATA31C2	B4DYI2	1134 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	FOXO3	O43524	673 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	FKBP5	Q13451	457 aa	Predicted RBP	7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TBCEL	Q5QJ74	424 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	STAG2	Q8N3U4	1231 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ZDHHC1	Q8WTX9	485 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SLC12A5	Q9H2X9	1139 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TERF2IP	Q9NYB0	399 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TBX22	Q9Y458	520 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	AKAP12	Q02952	1782 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	PTPRU	Q92729	1446 aa		7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	POLR3A	O14802	1390 aa	Predicted RBP	7.32	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TTLL8	A6PVC2	850 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	PSMA6	P60900	246 aa	Known RBP	7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	KCNA1	Q09470	495 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	EDC4	Q6P2E9	1401 aa	Known RBP	7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NRK	Q7Z2Y5	1582 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	KCTD17	Q8N5Z5	321 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	RHBDD1	Q8TEB9	315 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	CDK19	Q9BWU1	502 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SHPRH	Q149N8	1683 aa		7.31	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NWD1	Q149M9	1564 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	CPSF1	Q10570	1443 aa	Known RBP	7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	PPIP5K1	Q6PFW1	1433 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SMG6	Q86US8	1419 aa	Known RBP	7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	EML1	O00423	815 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	PPP1R12B	O60237	982 aa	Predicted RBP	7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SCNN1A	P37088	669 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TEAD4	Q15561	434 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SLC27A3	Q5K4L6	730 aa		7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.3	□□□□□ -1.24
NPIPB3-208	ENST00000537983	CHD2	O14647	1828 aa	Known RBP	7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	HIRA	P54198	1017 aa	Predicted RBP	7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	WDR43	Q15061	677 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	C4orf17	Q53FE4	359 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	GNAS	Q5JWF2	1037 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	TMEM214	Q6NUQ4	689 aa	Known RBP	7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	WAPL	Q7Z5K2	1190 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	MORC1	Q86VD1	984 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	COL26A1	Q96A83	441 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	DNMT3L	Q9UJW3	386 aa		7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	GNE	Q9Y223	722 aa	Known RBP	7.29	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ANKAR	Q7Z5J8	1434 aa		7.28	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms