RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GSDMBQ8TAX9 411 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC77Q9BR77 488 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SNRNP200O75643 2136 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 CASQ2O14958 399 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 PPP1R12BO60237 982 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SMC5Q8IY18 1101 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 MYOM3Q5VTT5 1437 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 RLBP1P12271 317 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SOGA3Q5TF21 947 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
CSMD1-215ENST00000537824 NUF2Q9BZD4 464 aa6.43□□□□□ -1.38
CSMD1-215ENST00000537824 TMEM110-MUSTN1A8MSY1 372 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 SLC8A1P32418 973 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 FLIIQ13045 1269 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC40Q4G0X9 1142 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 BMP2KLQ5H9B9 411 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC102BQ68D86 513 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 XAB2Q9HCS7 855 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC196A0A1B0GTZ2 297 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 TBC1D31Q96DN5 1066 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 MED12Q93074 2177 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 ARID5AQ03989 594 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 IQCGQ9H095 443 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 OPHN1O60890 802 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 ARHGEF2Q92974 986 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 DACT1Q9NYF0 836 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 MAP3K1Q13233 1512 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 LRRC45Q96CN5 670 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 SEC24BO95487 1268 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 LONRF3Q496Y0 759 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 VCX3BQ9H321 246 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 SCN8AQ9UQD0 1980 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 TRIM21P19474 475 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 SESN3P58005 492 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 E2F5Q15329 346 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 IRAK4Q9NWZ3 460 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 ABCA1O95477 2261 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 TTC36A6NLP5 189 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 COG7P83436 770 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 RNF10Q8N5U6 811 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 STAG1Q8WVM7 1258 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 MRPS27Q92552 414 aaKnown RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 E7EVH7 732 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 AKAP6Q13023 2319 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 CLTAP09496 248 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 ABTB1Q969K4 478 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 MCUR1Q96AQ8 359 aa6.42□□□□□ -1.38
CSMD1-215ENST00000537824 SPINK5Q9NQ38 1064 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF445P59923 1031 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 SSRP1Q08945 709 aaKnown RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 IFI16Q16666 785 aaKnown RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 HDGFL1Q5TGJ6 251 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 PSMD1Q99460 953 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 USP16Q9Y5T5 823 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 PSMC4P43686 418 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 SMIM24O75264 130 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 MUM1Q2TAK8 710 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 FERP16591 822 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 ZBTB17Q13105 803 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 KRT13P13646 458 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 CCT5P48643 541 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 NUCB1Q02818 461 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 CABS1Q96KC9 395 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 VPS41P49754 854 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 TPD52P55327 224 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 GNGT1P63211 74 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 ZKSCAN8Q15776 578 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 LRRC23Q53EV4 343 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 MCTP2Q6DN12 878 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 RAB11FIP4Q86YS3 637 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 PDE11AQ9HCR9 933 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 PTPN23Q9H3S7 1636 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC62Q6P9F0 684 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 DDX12PQ92771 950 aa6.41□□□□□ -1.38
CSMD1-215ENST00000537824 VIRMAQ69YN4 1812 aaKnown RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 JPH2Q9BR39 696 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 ORC3Q9UBD5 711 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF500O60304 480 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 F13A1P00488 732 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 HIP1RO75146 1068 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 GLRX3O76003 335 aaKnown RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 ZWINTO95229 277 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 AFMP43652 599 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 TTC22Q5TAA0 569 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 ZGPATQ8N5A5 531 aaKnown RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 ZNF215Q9UL58 517 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 MPDZO75970 2070 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 POLR3DP05423 398 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 RPSAP08865 295 aaKnown RBP6.4□□□□□ -1.38
CSMD1-215ENST00000537824 NEDD9Q14511 834 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 KCNG4Q8TDN1 519 aa6.4□□□□□ -1.38
CSMD1-215ENST00000537824 CCDC97Q96F63 343 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms